Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAFP15056 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRAFP15056 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.11■□□□□ 0.33
BRAFP15056 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAFP15056 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.11■□□□□ 0.33
BRAFP15056 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.11■□□□□ 0.33
BRAFP15056 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAFP15056 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
BRAFP15056 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
BRAFP15056 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAFP15056 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRAFP15056 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAFP15056 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.11■□□□□ 0.33
BRAFP15056 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BRAFP15056 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BRAFP15056 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.11■□□□□ 0.33
BRAFP15056 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAFP15056 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.11■□□□□ 0.33
BRAFP15056 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.11■□□□□ 0.33
BRAFP15056 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.11■□□□□ 0.33
BRAFP15056 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.11■□□□□ 0.33
BRAFP15056 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRAFP15056 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
BRAFP15056 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRAFP15056 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BRAFP15056 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.11■□□□□ 0.33
BRAFP15056 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
BRAFP15056 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.11■□□□□ 0.33
BRAFP15056 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAFP15056 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.1■□□□□ 0.33
BRAFP15056 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAFP15056 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
BRAFP15056 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAFP15056 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.1■□□□□ 0.33
BRAFP15056 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAFP15056 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.1■□□□□ 0.33
BRAFP15056 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
BRAFP15056 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAFP15056 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAFP15056 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAFP15056 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.1■□□□□ 0.33
BRAFP15056 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.1■□□□□ 0.33
BRAFP15056 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.1■□□□□ 0.33
BRAFP15056 AC092384.3-202ENST00000564646 2873 ntBASIC17.1■□□□□ 0.33
BRAFP15056 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAFP15056 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRAFP15056 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.1■□□□□ 0.33
BRAFP15056 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.1■□□□□ 0.33
BRAFP15056 AL020989.1-201ENST00000422979 469 ntBASIC17.1■□□□□ 0.33
BRAFP15056 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BRAFP15056 PRYP5-201ENST00000451909 266 ntBASIC17.1■□□□□ 0.33
BRAFP15056 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.1■□□□□ 0.33
BRAFP15056 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.1■□□□□ 0.33
BRAFP15056 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.1■□□□□ 0.33
BRAFP15056 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.1■□□□□ 0.33
BRAFP15056 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.1■□□□□ 0.33
BRAFP15056 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.1■□□□□ 0.33
BRAFP15056 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
BRAFP15056 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.1■□□□□ 0.33
BRAFP15056 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
BRAFP15056 AL022326.1-202ENST00000641533 845 ntBASIC17.1■□□□□ 0.33
BRAFP15056 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.1■□□□□ 0.33
BRAFP15056 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.1■□□□□ 0.33
BRAFP15056 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAFP15056 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
BRAFP15056 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BRAFP15056 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.1■□□□□ 0.33
BRAFP15056 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
BRAFP15056 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
BRAFP15056 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
BRAFP15056 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAFP15056 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRAFP15056 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.1■□□□□ 0.33
BRAFP15056 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
BRAFP15056 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.09■□□□□ 0.33
BRAFP15056 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.09■□□□□ 0.33
BRAFP15056 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
BRAFP15056 DBET-201ENST00000630918 3363 ntBASIC17.09■□□□□ 0.33
BRAFP15056 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 AC104640.1-201ENST00000562617 2109 ntBASIC17.09■□□□□ 0.33
BRAFP15056 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.09■□□□□ 0.33
BRAFP15056 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRAFP15056 AC003669.1-201ENST00000334569 611 ntBASIC17.09■□□□□ 0.33
BRAFP15056 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.09■□□□□ 0.33
BRAFP15056 KLF4P1-201ENST00000412782 1185 ntBASIC17.09■□□□□ 0.33
BRAFP15056 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
BRAFP15056 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
BRAFP15056 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.09■□□□□ 0.33
BRAFP15056 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.09■□□□□ 0.33
BRAFP15056 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms