Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A2P13942 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.88■□□□□ 0.77
COL11A2P13942 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
COL11A2P13942 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.88■□□□□ 0.77
COL11A2P13942 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL11A2P13942 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
COL11A2P13942 KRT18P64-201ENST00000434946 1219 ntBASIC19.88■□□□□ 0.77
COL11A2P13942 FO681548.1-201ENST00000455617 1132 ntBASIC19.88■□□□□ 0.77
COL11A2P13942 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.88■□□□□ 0.77
COL11A2P13942 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.88■□□□□ 0.77
COL11A2P13942 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.88■□□□□ 0.77
COL11A2P13942 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
COL11A2P13942 MSTO2P-201ENST00000314835 1709 ntBASIC19.87■□□□□ 0.77
COL11A2P13942 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL11A2P13942 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
COL11A2P13942 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A2P13942 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.87■□□□□ 0.77
COL11A2P13942 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A2P13942 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
COL11A2P13942 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.87■□□□□ 0.77
COL11A2P13942 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A2P13942 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.87■□□□□ 0.77
COL11A2P13942 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A2P13942 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A2P13942 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
COL11A2P13942 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A2P13942 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A2P13942 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL11A2P13942 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A2P13942 FO393414.2-201ENST00000405153 598 ntBASIC19.87■□□□□ 0.77
COL11A2P13942 TARDBPP1-201ENST00000442013 1203 ntBASIC19.87■□□□□ 0.77
COL11A2P13942 AC245100.5-201ENST00000452108 331 ntBASIC19.87■□□□□ 0.77
COL11A2P13942 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.87■□□□□ 0.77
COL11A2P13942 AL359711.2-201ENST00000563105 872 ntBASIC19.87■□□□□ 0.77
COL11A2P13942 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.87■□□□□ 0.77
COL11A2P13942 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A2P13942 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A2P13942 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL11A2P13942 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.87■□□□□ 0.77
COL11A2P13942 GGT3P-204ENST00000453783 1664 ntBASIC19.87■□□□□ 0.77
COL11A2P13942 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.87■□□□□ 0.77
COL11A2P13942 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A2P13942 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A2P13942 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A2P13942 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.86■□□□□ 0.77
COL11A2P13942 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
COL11A2P13942 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
COL11A2P13942 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A2P13942 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A2P13942 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A2P13942 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A2P13942 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.86■□□□□ 0.77
COL11A2P13942 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.86■□□□□ 0.77
COL11A2P13942 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.86■□□□□ 0.77
COL11A2P13942 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.86■□□□□ 0.77
COL11A2P13942 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
COL11A2P13942 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.86■□□□□ 0.77
COL11A2P13942 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.86■□□□□ 0.77
COL11A2P13942 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.86■□□□□ 0.77
COL11A2P13942 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.86■□□□□ 0.77
COL11A2P13942 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A2P13942 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
COL11A2P13942 U82695.1-201ENST00000635752 1889 ntBASIC19.86■□□□□ 0.77
COL11A2P13942 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A2P13942 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL11A2P13942 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A2P13942 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL11A2P13942 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.85■□□□□ 0.77
COL11A2P13942 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.85■□□□□ 0.77
COL11A2P13942 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A2P13942 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A2P13942 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
COL11A2P13942 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A2P13942 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.85■□□□□ 0.77
COL11A2P13942 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
COL11A2P13942 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A2P13942 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.85■□□□□ 0.77
COL11A2P13942 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.85■□□□□ 0.77
COL11A2P13942 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A2P13942 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A2P13942 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.85■□□□□ 0.77
COL11A2P13942 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.85■□□□□ 0.77
COL11A2P13942 AC120045.2-201ENST00000567334 178 ntBASIC19.85■□□□□ 0.77
COL11A2P13942 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.85■□□□□ 0.77
COL11A2P13942 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.85■□□□□ 0.77
COL11A2P13942 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A2P13942 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
COL11A2P13942 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A2P13942 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.85■□□□□ 0.77
COL11A2P13942 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A2P13942 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A2P13942 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A2P13942 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.85■□□□□ 0.77
COL11A2P13942 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.85■□□□□ 0.77
COL11A2P13942 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
COL11A2P13942 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
COL11A2P13942 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.85■□□□□ 0.77
COL11A2P13942 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A2P13942 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL11A2P13942 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms