Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
CCL4P13236 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.53■□□□□ 0.08
CCL4P13236 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 SPDYE19P-201ENST00000338590 713 ntBASIC15.53■□□□□ 0.08
CCL4P13236 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.53■□□□□ 0.08
CCL4P13236 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 DGCR5-201ENST00000399539 862 ntBASIC15.53■□□□□ 0.08
CCL4P13236 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CCL4P13236 ZNF890P-202ENST00000530367 1156 ntBASIC15.53■□□□□ 0.08
CCL4P13236 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.53■□□□□ 0.08
CCL4P13236 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.53■□□□□ 0.08
CCL4P13236 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.53■□□□□ 0.08
CCL4P13236 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.53■□□□□ 0.08
CCL4P13236 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.53■□□□□ 0.08
CCL4P13236 AC061975.2-201ENST00000581722 295 ntBASIC15.53■□□□□ 0.08
CCL4P13236 AC024267.1-201ENST00000582320 895 ntBASIC15.53■□□□□ 0.08
CCL4P13236 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.53■□□□□ 0.08
CCL4P13236 AC020765.3-201ENST00000613051 740 ntBASIC15.53■□□□□ 0.08
CCL4P13236 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.53■□□□□ 0.08
CCL4P13236 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
CCL4P13236 GPAA1P2-202ENST00000606848 1787 ntBASIC15.53■□□□□ 0.08
CCL4P13236 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.53■□□□□ 0.08
CCL4P13236 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.53■□□□□ 0.08
CCL4P13236 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.53■□□□□ 0.08
CCL4P13236 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL4P13236 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CCL4P13236 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL4P13236 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CCL4P13236 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL4P13236 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.52■□□□□ 0.08
CCL4P13236 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL4P13236 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CCL4P13236 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CCL4P13236 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.52■□□□□ 0.08
CCL4P13236 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCL4P13236 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.52■□□□□ 0.08
CCL4P13236 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL4P13236 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL4P13236 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL4P13236 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL4P13236 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CCL4P13236 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CCL4P13236 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL4P13236 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.52■□□□□ 0.08
CCL4P13236 AC007274.1-201ENST00000439805 662 ntBASIC15.52■□□□□ 0.08
CCL4P13236 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.52■□□□□ 0.08
CCL4P13236 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCL4P13236 SPDYE18-201ENST00000510091 1050 ntBASIC15.52■□□□□ 0.08
CCL4P13236 DOC2GP-202ENST00000514950 1163 ntBASIC15.52■□□□□ 0.08
CCL4P13236 AP002490.2-201ENST00000524791 560 ntBASIC15.52■□□□□ 0.08
CCL4P13236 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.52■□□□□ 0.08
CCL4P13236 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.52■□□□□ 0.08
CCL4P13236 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCL4P13236 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.52■□□□□ 0.08
CCL4P13236 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CCL4P13236 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL4P13236 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL4P13236 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCL4P13236 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL4P13236 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL4P13236 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.52■□□□□ 0.07
CCL4P13236 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CCL4P13236 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CCL4P13236 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCL4P13236 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL4P13236 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL4P13236 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL4P13236 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.52■□□□□ 0.07
CCL4P13236 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.52■□□□□ 0.07
CCL4P13236 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCL4P13236 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL4P13236 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL4P13236 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CCL4P13236 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL4P13236 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CCL4P13236 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCL4P13236 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL4P13236 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.51■□□□□ 0.07
CCL4P13236 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL4P13236 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.51■□□□□ 0.07
CCL4P13236 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CCL4P13236 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL4P13236 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL4P13236 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.51■□□□□ 0.07
CCL4P13236 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL4P13236 DFFBP1-201ENST00000433250 979 ntBASIC15.51■□□□□ 0.07
CCL4P13236 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CCL4P13236 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.51■□□□□ 0.07
CCL4P13236 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL4P13236 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL4P13236 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.51■□□□□ 0.07
CCL4P13236 CHCHD2P3-201ENST00000603038 451 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms