Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL11A1P12107 AC007541.1-201ENST00000570282 1469 ntBASIC18.53■□□□□ 0.56
COL11A1P12107 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL11A1P12107 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.53■□□□□ 0.56
COL11A1P12107 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COL11A1P12107 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
COL11A1P12107 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL11A1P12107 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL11A1P12107 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
COL11A1P12107 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.53■□□□□ 0.56
COL11A1P12107 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL11A1P12107 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL11A1P12107 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COL11A1P12107 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL11A1P12107 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL11A1P12107 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL11A1P12107 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.53■□□□□ 0.56
COL11A1P12107 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL11A1P12107 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
COL11A1P12107 AL512384.1-201ENST00000406683 331 ntBASIC18.53■□□□□ 0.56
COL11A1P12107 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL11A1P12107 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.53■□□□□ 0.56
COL11A1P12107 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COL11A1P12107 AC123567.1-201ENST00000548294 1261 ntBASIC18.53■□□□□ 0.56
COL11A1P12107 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.53■□□□□ 0.56
COL11A1P12107 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.53■□□□□ 0.56
COL11A1P12107 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.53■□□□□ 0.56
COL11A1P12107 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.53■□□□□ 0.56
COL11A1P12107 MIR6069-201ENST00000620069 79 ntBASIC18.53■□□□□ 0.56
COL11A1P12107 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.52■□□□□ 0.56
COL11A1P12107 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.52■□□□□ 0.56
COL11A1P12107 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL11A1P12107 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL11A1P12107 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL11A1P12107 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.52■□□□□ 0.56
COL11A1P12107 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.52■□□□□ 0.56
COL11A1P12107 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
COL11A1P12107 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
COL11A1P12107 AL592424.1-201ENST00000563624 1536 ntBASIC18.52■□□□□ 0.56
COL11A1P12107 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.52■□□□□ 0.56
COL11A1P12107 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL11A1P12107 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL11A1P12107 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
COL11A1P12107 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.52■□□□□ 0.56
COL11A1P12107 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
COL11A1P12107 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.52■□□□□ 0.56
COL11A1P12107 ELK1P1-201ENST00000485699 580 ntBASIC18.52■□□□□ 0.56
COL11A1P12107 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.52■□□□□ 0.56
COL11A1P12107 CTBP2P3-201ENST00000585629 1255 ntBASIC18.52■□□□□ 0.56
COL11A1P12107 AC017083.2-201ENST00000608069 979 ntBASIC18.52■□□□□ 0.56
COL11A1P12107 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.52■□□□□ 0.56
COL11A1P12107 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL11A1P12107 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL11A1P12107 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL11A1P12107 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.52■□□□□ 0.55
COL11A1P12107 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.52■□□□□ 0.55
COL11A1P12107 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.52■□□□□ 0.55
COL11A1P12107 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL11A1P12107 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL11A1P12107 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
COL11A1P12107 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL11A1P12107 GPR53P-205ENST00000457298 1084 ntBASIC18.51■□□□□ 0.55
COL11A1P12107 AC074044.1-201ENST00000609673 707 ntBASIC18.51■□□□□ 0.55
COL11A1P12107 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL11A1P12107 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL11A1P12107 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
COL11A1P12107 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.51■□□□□ 0.55
COL11A1P12107 LETM1P2-201ENST00000597330 2178 ntBASIC18.51■□□□□ 0.55
COL11A1P12107 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL11A1P12107 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL11A1P12107 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL11A1P12107 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.51■□□□□ 0.55
COL11A1P12107 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL11A1P12107 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL11A1P12107 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.51■□□□□ 0.55
COL11A1P12107 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL11A1P12107 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL11A1P12107 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.51■□□□□ 0.55
COL11A1P12107 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.51■□□□□ 0.55
COL11A1P12107 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
COL11A1P12107 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.51■□□□□ 0.55
COL11A1P12107 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.51■□□□□ 0.55
COL11A1P12107 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.51■□□□□ 0.55
COL11A1P12107 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.51■□□□□ 0.55
COL11A1P12107 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.51■□□□□ 0.55
COL11A1P12107 Z97205.2-201ENST00000564697 1639 ntBASIC18.51■□□□□ 0.55
COL11A1P12107 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL11A1P12107 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL11A1P12107 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.5■□□□□ 0.55
COL11A1P12107 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.5■□□□□ 0.55
COL11A1P12107 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.5■□□□□ 0.55
COL11A1P12107 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
COL11A1P12107 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL11A1P12107 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms