Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.4■□□□□ 0.06
UBL4AP11441 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.4■□□□□ 0.06
UBL4AP11441 OR7E47P-204ENST00000575924 449 ntBASIC15.4■□□□□ 0.06
UBL4AP11441 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.4■□□□□ 0.06
UBL4AP11441 MIR4492-201ENST00000581627 80 ntBASIC15.4■□□□□ 0.06
UBL4AP11441 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBL4AP11441 SLC22A20-204ENST00000530038 1673 ntBASIC15.4■□□□□ 0.06
UBL4AP11441 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBL4AP11441 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBL4AP11441 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBL4AP11441 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.4■□□□□ 0.06
UBL4AP11441 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBL4AP11441 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.4■□□□□ 0.06
UBL4AP11441 AC006538.1-201ENST00000567905 1585 ntBASIC15.4■□□□□ 0.06
UBL4AP11441 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBL4AP11441 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBL4AP11441 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
UBL4AP11441 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.4■□□□□ 0.06
UBL4AP11441 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBL4AP11441 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.4■□□□□ 0.06
UBL4AP11441 AC092171.3-201ENST00000610122 2651 ntBASIC15.4■□□□□ 0.06
UBL4AP11441 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBL4AP11441 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
UBL4AP11441 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.39■□□□□ 0.05
UBL4AP11441 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.39■□□□□ 0.05
UBL4AP11441 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.39■□□□□ 0.05
UBL4AP11441 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.39■□□□□ 0.05
UBL4AP11441 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBL4AP11441 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBL4AP11441 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBL4AP11441 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.39■□□□□ 0.05
UBL4AP11441 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBL4AP11441 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.39■□□□□ 0.05
UBL4AP11441 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBL4AP11441 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.39■□□□□ 0.05
UBL4AP11441 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
UBL4AP11441 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
UBL4AP11441 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
UBL4AP11441 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.39■□□□□ 0.05
UBL4AP11441 AC087641.1-201ENST00000557561 1021 ntBASIC15.39■□□□□ 0.05
UBL4AP11441 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
UBL4AP11441 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.39■□□□□ 0.05
UBL4AP11441 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.39■□□□□ 0.05
UBL4AP11441 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.39■□□□□ 0.05
UBL4AP11441 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
UBL4AP11441 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.39■□□□□ 0.05
UBL4AP11441 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
UBL4AP11441 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.39■□□□□ 0.05
UBL4AP11441 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.39■□□□□ 0.05
UBL4AP11441 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.39■□□□□ 0.05
UBL4AP11441 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.39■□□□□ 0.05
UBL4AP11441 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
UBL4AP11441 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.39■□□□□ 0.05
UBL4AP11441 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.39■□□□□ 0.05
UBL4AP11441 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.39■□□□□ 0.05
UBL4AP11441 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.38■□□□□ 0.05
UBL4AP11441 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.38■□□□□ 0.05
UBL4AP11441 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.38■□□□□ 0.05
UBL4AP11441 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
UBL4AP11441 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.38■□□□□ 0.05
UBL4AP11441 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.38■□□□□ 0.05
UBL4AP11441 CYP2A7P1-201ENST00000595391 815 ntBASIC15.38■□□□□ 0.05
UBL4AP11441 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.38■□□□□ 0.05
UBL4AP11441 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.38■□□□□ 0.05
UBL4AP11441 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
UBL4AP11441 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.38■□□□□ 0.05
UBL4AP11441 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
UBL4AP11441 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
UBL4AP11441 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.38■□□□□ 0.05
UBL4AP11441 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
UBL4AP11441 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UBL4AP11441 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.38■□□□□ 0.05
UBL4AP11441 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
UBL4AP11441 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
UBL4AP11441 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBL4AP11441 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
UBL4AP11441 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.37■□□□□ 0.05
UBL4AP11441 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.37■□□□□ 0.05
UBL4AP11441 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBL4AP11441 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBL4AP11441 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.37■□□□□ 0.05
UBL4AP11441 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms