Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 AP000344.2-201ENST00000512987 629 ntBASIC19.2■□□□□ 0.66
CALM3P0DP25 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.2■□□□□ 0.66
CALM3P0DP25 AC105233.2-201ENST00000523697 349 ntBASIC19.2■□□□□ 0.66
CALM3P0DP25 AF228730.5-201ENST00000530288 346 ntBASIC19.2■□□□□ 0.66
CALM3P0DP25 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.2■□□□□ 0.66
CALM3P0DP25 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.2■□□□□ 0.66
CALM3P0DP25 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.2■□□□□ 0.66
CALM3P0DP25 AC027307.2-201ENST00000591252 911 ntBASIC19.2■□□□□ 0.66
CALM3P0DP25 AC022145.2-201ENST00000598203 171 ntBASIC19.2■□□□□ 0.66
CALM3P0DP25 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.2■□□□□ 0.66
CALM3P0DP25 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.2■□□□□ 0.66
CALM3P0DP25 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALM3P0DP25 AL513210.1-201ENST00000629608 234 ntBASIC19.2■□□□□ 0.66
CALM3P0DP25 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALM3P0DP25 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALM3P0DP25 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CALM3P0DP25 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALM3P0DP25 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CALM3P0DP25 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALM3P0DP25 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALM3P0DP25 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.2■□□□□ 0.66
CALM3P0DP25 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CALM3P0DP25 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALM3P0DP25 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.2■□□□□ 0.66
CALM3P0DP25 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALM3P0DP25 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALM3P0DP25 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CALM3P0DP25 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CALM3P0DP25 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CALM3P0DP25 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.2■□□□□ 0.66
CALM3P0DP25 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.19■□□□□ 0.66
CALM3P0DP25 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
CALM3P0DP25 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.19■□□□□ 0.66
CALM3P0DP25 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.19■□□□□ 0.66
CALM3P0DP25 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.19■□□□□ 0.66
CALM3P0DP25 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.19■□□□□ 0.66
CALM3P0DP25 SPCS2P4-201ENST00000436160 681 ntBASIC19.19■□□□□ 0.66
CALM3P0DP25 AP006288.1-201ENST00000446065 395 ntBASIC19.19■□□□□ 0.66
CALM3P0DP25 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.19■□□□□ 0.66
CALM3P0DP25 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.19■□□□□ 0.66
CALM3P0DP25 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.19■□□□□ 0.66
CALM3P0DP25 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.19■□□□□ 0.66
CALM3P0DP25 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.19■□□□□ 0.66
CALM3P0DP25 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.19■□□□□ 0.66
CALM3P0DP25 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.19■□□□□ 0.66
CALM3P0DP25 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.19■□□□□ 0.66
CALM3P0DP25 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.19■□□□□ 0.66
CALM3P0DP25 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 AC005622.1-201ENST00000636801 1703 ntBASIC19.19■□□□□ 0.66
CALM3P0DP25 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.19■□□□□ 0.66
CALM3P0DP25 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 AC084018.2-201ENST00000613093 2607 ntBASIC19.19■□□□□ 0.66
CALM3P0DP25 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALM3P0DP25 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CALM3P0DP25 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CALM3P0DP25 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CALM3P0DP25 U82695.1-201ENST00000635752 1889 ntBASIC19.18■□□□□ 0.66
CALM3P0DP25 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CALM3P0DP25 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CALM3P0DP25 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALM3P0DP25 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALM3P0DP25 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALM3P0DP25 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CALM3P0DP25 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALM3P0DP25 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALM3P0DP25 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.18■□□□□ 0.66
CALM3P0DP25 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CALM3P0DP25 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALM3P0DP25 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.18■□□□□ 0.66
CALM3P0DP25 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALM3P0DP25 AL592309.1-201ENST00000443127 649 ntBASIC19.18■□□□□ 0.66
CALM3P0DP25 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.18■□□□□ 0.66
CALM3P0DP25 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.18■□□□□ 0.66
CALM3P0DP25 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CALM3P0DP25 IGHV3-62-201ENST00000520057 340 ntBASIC19.18■□□□□ 0.66
CALM3P0DP25 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CALM3P0DP25 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.18■□□□□ 0.66
CALM3P0DP25 LINC01225-203ENST00000563550 1244 ntBASIC19.18■□□□□ 0.66
CALM3P0DP25 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.18■□□□□ 0.66
CALM3P0DP25 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.18■□□□□ 0.66
CALM3P0DP25 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALM3P0DP25 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALM3P0DP25 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CALM3P0DP25 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.18■□□□□ 0.66
CALM3P0DP25 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms