Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.52■□□□□ 0.56
CYP3A4P08684 CYMP-203ENST00000474680 1263 ntBASIC18.52■□□□□ 0.56
CYP3A4P08684 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.52■□□□□ 0.56
CYP3A4P08684 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.52■□□□□ 0.56
CYP3A4P08684 MIR6080-201ENST00000617359 66 ntBASIC18.52■□□□□ 0.56
CYP3A4P08684 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CYP3A4P08684 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CYP3A4P08684 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CYP3A4P08684 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CYP3A4P08684 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.52■□□□□ 0.55
CYP3A4P08684 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CYP3A4P08684 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CYP3A4P08684 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CYP3A4P08684 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.52■□□□□ 0.55
CYP3A4P08684 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYP3A4P08684 AC005052.1-201ENST00000625181 2492 ntBASIC18.51■□□□□ 0.55
CYP3A4P08684 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CYP3A4P08684 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYP3A4P08684 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYP3A4P08684 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CYP3A4P08684 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CYP3A4P08684 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYP3A4P08684 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CYP3A4P08684 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CYP3A4P08684 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CYP3A4P08684 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.51■□□□□ 0.55
CYP3A4P08684 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.51■□□□□ 0.55
CYP3A4P08684 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYP3A4P08684 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.51■□□□□ 0.55
CYP3A4P08684 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CYP3A4P08684 FAM86GP-201ENST00000448322 971 ntBASIC18.51■□□□□ 0.55
CYP3A4P08684 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYP3A4P08684 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CYP3A4P08684 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.51■□□□□ 0.55
CYP3A4P08684 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.51■□□□□ 0.55
CYP3A4P08684 AL365330.1-201ENST00000607459 531 ntBASIC18.51■□□□□ 0.55
CYP3A4P08684 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYP3A4P08684 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.51■□□□□ 0.55
CYP3A4P08684 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.51■□□□□ 0.55
CYP3A4P08684 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CYP3A4P08684 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYP3A4P08684 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYP3A4P08684 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYP3A4P08684 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.51■□□□□ 0.55
CYP3A4P08684 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.51■□□□□ 0.55
CYP3A4P08684 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CYP3A4P08684 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CYP3A4P08684 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 KLF2P3-201ENST00000451977 1087 ntBASIC18.5■□□□□ 0.55
CYP3A4P08684 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.5■□□□□ 0.55
CYP3A4P08684 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.5■□□□□ 0.55
CYP3A4P08684 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.5■□□□□ 0.55
CYP3A4P08684 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CYP3A4P08684 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CYP3A4P08684 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.5■□□□□ 0.55
CYP3A4P08684 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.5■□□□□ 0.55
CYP3A4P08684 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP3A4P08684 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.5■□□□□ 0.55
CYP3A4P08684 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP3A4P08684 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CYP3A4P08684 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP3A4P08684 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.49■□□□□ 0.55
CYP3A4P08684 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.49■□□□□ 0.55
CYP3A4P08684 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.49■□□□□ 0.55
CYP3A4P08684 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CYP3A4P08684 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CYP3A4P08684 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP3A4P08684 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP3A4P08684 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP3A4P08684 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP3A4P08684 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.49■□□□□ 0.55
CYP3A4P08684 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.49■□□□□ 0.55
CYP3A4P08684 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.49■□□□□ 0.55
CYP3A4P08684 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.49■□□□□ 0.55
CYP3A4P08684 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.49■□□□□ 0.55
CYP3A4P08684 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.49■□□□□ 0.55
CYP3A4P08684 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.49■□□□□ 0.55
CYP3A4P08684 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.49■□□□□ 0.55
CYP3A4P08684 BANF1P1-201ENST00000553684 263 ntBASIC18.49■□□□□ 0.55
CYP3A4P08684 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.49■□□□□ 0.55
CYP3A4P08684 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.49■□□□□ 0.55
CYP3A4P08684 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.49■□□□□ 0.55
CYP3A4P08684 MIR4321-201ENST00000592276 80 ntBASIC18.49■□□□□ 0.55
CYP3A4P08684 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
CYP3A4P08684 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms