Protein–RNA interactions for Protein: P08519

LPA, Apolipoprotein(a), humanhuman

Predictions only

Length 4,548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPAP08519 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC8.98□□□□□ -0.97
LPAP08519 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC8.98□□□□□ -0.97
LPAP08519 RN7SL560P-201ENST00000577943 264 ntBASIC8.98□□□□□ -0.97
LPAP08519 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC8.98□□□□□ -0.97
LPAP08519 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC8.98□□□□□ -0.97
LPAP08519 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
LPAP08519 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LPAP08519 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC8.98□□□□□ -0.97
LPAP08519 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LPAP08519 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LPAP08519 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC8.98□□□□□ -0.97
LPAP08519 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LPAP08519 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LPAP08519 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
LPAP08519 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC8.98□□□□□ -0.97
LPAP08519 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC8.98□□□□□ -0.97
LPAP08519 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
LPAP08519 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
LPAP08519 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LPAP08519 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
LPAP08519 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LPAP08519 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC8.98□□□□□ -0.97
LPAP08519 SDHAP3-202ENST00000515467 728 ntBASIC8.98□□□□□ -0.97
LPAP08519 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC8.98□□□□□ -0.97
LPAP08519 AC005695.3-201ENST00000614522 232 ntBASIC8.98□□□□□ -0.97
LPAP08519 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LPAP08519 GGT4P-201ENST00000623672 1708 ntBASIC8.98□□□□□ -0.97
LPAP08519 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC8.98□□□□□ -0.97
LPAP08519 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LPAP08519 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC8.97□□□□□ -0.97
LPAP08519 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC8.97□□□□□ -0.97
LPAP08519 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC8.97□□□□□ -0.97
LPAP08519 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
LPAP08519 VMO1-203ENST00000416307 712 ntTSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 KRT8P13-201ENST00000463294 1010 ntBASIC8.97□□□□□ -0.97
LPAP08519 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
LPAP08519 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
LPAP08519 USE1-206ENST00000595101 1776 ntTSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
LPAP08519 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
LPAP08519 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
LPAP08519 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
LPAP08519 AC006033.1-201ENST00000440505 426 ntBASIC8.97□□□□□ -0.97
LPAP08519 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 REEP1-202ENST00000453231 940 ntTSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC8.97□□□□□ -0.97
LPAP08519 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC8.97□□□□□ -0.97
LPAP08519 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 NEU3-202ENST00000526068 431 ntTSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 TIMM17BP1-201ENST00000545713 516 ntBASIC8.97□□□□□ -0.97
LPAP08519 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
LPAP08519 AL359711.2-201ENST00000563105 872 ntBASIC8.97□□□□□ -0.97
LPAP08519 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
LPAP08519 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC8.97□□□□□ -0.97
LPAP08519 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 AC104457.1-201ENST00000401024 814 ntBASIC8.97□□□□□ -0.97
LPAP08519 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC8.97□□□□□ -0.97
LPAP08519 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 QPRT-203ENST00000562473 579 ntTSL 3 BASIC8.97□□□□□ -0.97
LPAP08519 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC8.97□□□□□ -0.97
LPAP08519 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC8.97□□□□□ -0.97
LPAP08519 ABBA01031660.1-201ENST00000635219 756 ntBASIC8.97□□□□□ -0.97
LPAP08519 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC8.97□□□□□ -0.97
LPAP08519 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC8.97□□□□□ -0.97
LPAP08519 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LPAP08519 AL031731.1-201ENST00000642131 2094 ntBASIC8.97□□□□□ -0.97
LPAP08519 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC8.97□□□□□ -0.97
LPAP08519 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms