Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.8□□□□□ -0.36
TRBV12-3P01733 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 KRT18P13-201ENST00000400056 1290 ntBASIC12.8□□□□□ -0.36
TRBV12-3P01733 UPF3AP3-201ENST00000420996 769 ntBASIC12.8□□□□□ -0.36
TRBV12-3P01733 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV12-3P01733 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRBV12-3P01733 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 AL355306.1-201ENST00000415580 579 ntBASIC12.79□□□□□ -0.36
TRBV12-3P01733 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms