Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.72■□□□□ 0.11
CLPTM1O96005 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CLPTM1O96005 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CLPTM1O96005 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CLPTM1O96005 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.72■□□□□ 0.11
CLPTM1O96005 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.72■□□□□ 0.11
CLPTM1O96005 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.72■□□□□ 0.11
CLPTM1O96005 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 PCED1CP-201ENST00000419887 785 ntBASIC15.72■□□□□ 0.11
CLPTM1O96005 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.72■□□□□ 0.11
CLPTM1O96005 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.72■□□□□ 0.11
CLPTM1O96005 AL136038.3-201ENST00000561909 1096 ntBASIC15.72■□□□□ 0.11
CLPTM1O96005 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CLPTM1O96005 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.72■□□□□ 0.11
CLPTM1O96005 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLPTM1O96005 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CLPTM1O96005 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLPTM1O96005 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CLPTM1O96005 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
CLPTM1O96005 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.71■□□□□ 0.11
CLPTM1O96005 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CLPTM1O96005 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.71■□□□□ 0.11
CLPTM1O96005 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.71■□□□□ 0.11
CLPTM1O96005 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.71■□□□□ 0.11
CLPTM1O96005 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CLPTM1O96005 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.71■□□□□ 0.11
CLPTM1O96005 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.71■□□□□ 0.11
CLPTM1O96005 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.71■□□□□ 0.11
CLPTM1O96005 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.71■□□□□ 0.11
CLPTM1O96005 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.71■□□□□ 0.11
CLPTM1O96005 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.71■□□□□ 0.11
CLPTM1O96005 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.71■□□□□ 0.11
CLPTM1O96005 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.71■□□□□ 0.11
CLPTM1O96005 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.71■□□□□ 0.11
CLPTM1O96005 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.71■□□□□ 0.11
CLPTM1O96005 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.71■□□□□ 0.11
CLPTM1O96005 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.71■□□□□ 0.11
CLPTM1O96005 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLPTM1O96005 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLPTM1O96005 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLPTM1O96005 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLPTM1O96005 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CLPTM1O96005 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLPTM1O96005 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.71■□□□□ 0.1
CLPTM1O96005 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.7■□□□□ 0.1
CLPTM1O96005 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.7■□□□□ 0.1
CLPTM1O96005 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.7■□□□□ 0.1
CLPTM1O96005 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CLPTM1O96005 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.7■□□□□ 0.1
CLPTM1O96005 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.7■□□□□ 0.1
CLPTM1O96005 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.7■□□□□ 0.1
CLPTM1O96005 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CLPTM1O96005 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLPTM1O96005 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.7■□□□□ 0.1
CLPTM1O96005 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms