Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
VAPBO95292 ACTL9-202ENST00000612068 1252 ntBASIC16.69■□□□□ 0.26
VAPBO95292 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.69■□□□□ 0.26
VAPBO95292 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.69■□□□□ 0.26
VAPBO95292 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAPBO95292 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAPBO95292 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAPBO95292 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VAPBO95292 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VAPBO95292 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VAPBO95292 AC012569.1-201ENST00000591191 1524 ntBASIC16.69■□□□□ 0.26
VAPBO95292 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAPBO95292 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.69■□□□□ 0.26
VAPBO95292 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
VAPBO95292 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAPBO95292 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VAPBO95292 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.69■□□□□ 0.26
VAPBO95292 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.69■□□□□ 0.26
VAPBO95292 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
VAPBO95292 AL513523.2-202ENST00000427283 2040 ntBASIC16.69■□□□□ 0.26
VAPBO95292 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
VAPBO95292 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.68■□□□□ 0.26
VAPBO95292 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.68■□□□□ 0.26
VAPBO95292 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.68■□□□□ 0.26
VAPBO95292 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.68■□□□□ 0.26
VAPBO95292 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.68■□□□□ 0.26
VAPBO95292 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.68■□□□□ 0.26
VAPBO95292 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.68■□□□□ 0.26
VAPBO95292 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
VAPBO95292 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
VAPBO95292 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
VAPBO95292 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.68■□□□□ 0.26
VAPBO95292 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.68■□□□□ 0.26
VAPBO95292 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
VAPBO95292 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.68■□□□□ 0.26
VAPBO95292 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.68■□□□□ 0.26
VAPBO95292 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.68■□□□□ 0.26
VAPBO95292 PRSS29P-201ENST00000440800 595 ntBASIC16.68■□□□□ 0.26
VAPBO95292 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.68■□□□□ 0.26
VAPBO95292 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.68■□□□□ 0.26
VAPBO95292 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.68■□□□□ 0.26
VAPBO95292 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.68■□□□□ 0.26
VAPBO95292 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.68■□□□□ 0.26
VAPBO95292 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
VAPBO95292 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
VAPBO95292 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.68■□□□□ 0.26
VAPBO95292 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
VAPBO95292 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.68■□□□□ 0.26
VAPBO95292 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
VAPBO95292 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAPBO95292 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.68■□□□□ 0.26
VAPBO95292 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 PCGF3-213ENST00000620529 1899 ntBASIC16.67■□□□□ 0.26
VAPBO95292 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
VAPBO95292 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.67■□□□□ 0.26
VAPBO95292 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.67■□□□□ 0.26
VAPBO95292 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
VAPBO95292 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.67■□□□□ 0.26
VAPBO95292 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
VAPBO95292 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.67■□□□□ 0.26
VAPBO95292 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAPBO95292 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
VAPBO95292 AC093909.1-201ENST00000504731 1122 ntBASIC16.67■□□□□ 0.26
VAPBO95292 RNA5SP419-201ENST00000515908 135 ntBASIC16.67■□□□□ 0.26
VAPBO95292 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.67■□□□□ 0.26
VAPBO95292 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.67■□□□□ 0.26
VAPBO95292 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
VAPBO95292 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms