Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.48■□□□□ 0.39
RTN3O95197 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.48■□□□□ 0.39
RTN3O95197 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
RTN3O95197 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
RTN3O95197 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTN3O95197 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RTN3O95197 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RTN3O95197 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.47■□□□□ 0.39
RTN3O95197 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RTN3O95197 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.47■□□□□ 0.39
RTN3O95197 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.47■□□□□ 0.39
RTN3O95197 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.47■□□□□ 0.39
RTN3O95197 UBALD1-205ENST00000590891 2641 ntBASIC17.47■□□□□ 0.39
RTN3O95197 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.47■□□□□ 0.39
RTN3O95197 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
RTN3O95197 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.47■□□□□ 0.39
RTN3O95197 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.47■□□□□ 0.39
RTN3O95197 KRT18P32-201ENST00000424695 1287 ntBASIC17.47■□□□□ 0.39
RTN3O95197 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.47■□□□□ 0.39
RTN3O95197 HLA-J-203ENST00000494367 1087 ntBASIC17.47■□□□□ 0.39
RTN3O95197 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.47■□□□□ 0.39
RTN3O95197 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.47■□□□□ 0.39
RTN3O95197 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.47■□□□□ 0.39
RTN3O95197 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.47■□□□□ 0.39
RTN3O95197 AC093520.2-201ENST00000561830 333 ntBASIC17.47■□□□□ 0.39
RTN3O95197 LINC01225-203ENST00000563550 1244 ntBASIC17.47■□□□□ 0.39
RTN3O95197 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.47■□□□□ 0.39
RTN3O95197 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.47■□□□□ 0.39
RTN3O95197 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
RTN3O95197 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RTN3O95197 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.47■□□□□ 0.39
RTN3O95197 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN3O95197 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN3O95197 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN3O95197 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN3O95197 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN3O95197 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
RTN3O95197 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN3O95197 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN3O95197 SNX33P1-201ENST00000592116 1762 ntBASIC17.46■□□□□ 0.39
RTN3O95197 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
RTN3O95197 AL671710.1-201ENST00000610245 2349 ntBASIC17.46■□□□□ 0.39
RTN3O95197 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.46■□□□□ 0.39
RTN3O95197 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.46■□□□□ 0.39
RTN3O95197 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.46■□□□□ 0.39
RTN3O95197 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.46■□□□□ 0.39
RTN3O95197 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTN3O95197 AC069335.1-201ENST00000489972 472 ntBASIC17.46■□□□□ 0.39
RTN3O95197 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.46■□□□□ 0.39
RTN3O95197 AC004449.1-201ENST00000564240 433 ntBASIC17.46■□□□□ 0.39
RTN3O95197 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN3O95197 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.46■□□□□ 0.39
RTN3O95197 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.46■□□□□ 0.39
RTN3O95197 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN3O95197 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.46■□□□□ 0.39
RTN3O95197 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTN3O95197 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RTN3O95197 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN3O95197 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.46■□□□□ 0.39
RTN3O95197 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RTN3O95197 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.46■□□□□ 0.38
RTN3O95197 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
RTN3O95197 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.45■□□□□ 0.38
RTN3O95197 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.45■□□□□ 0.38
RTN3O95197 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.45■□□□□ 0.38
RTN3O95197 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.45■□□□□ 0.38
RTN3O95197 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RTN3O95197 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN3O95197 AL139400.1-201ENST00000366220 510 ntBASIC17.45■□□□□ 0.38
RTN3O95197 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms