Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL365203.3-201ENST00000609742 2057 ntBASIC16.54■□□□□ 0.24
PHGDHO43175 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PHGDHO43175 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
PHGDHO43175 HYMAI-201ENST00000635591 3347 ntBASIC16.53■□□□□ 0.24
PHGDHO43175 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PHGDHO43175 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
PHGDHO43175 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.53■□□□□ 0.24
PHGDHO43175 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.53■□□□□ 0.24
PHGDHO43175 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.53■□□□□ 0.24
PHGDHO43175 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.53■□□□□ 0.24
PHGDHO43175 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.53■□□□□ 0.24
PHGDHO43175 UNC93B7-201ENST00000509439 705 ntBASIC16.53■□□□□ 0.24
PHGDHO43175 OR7E14P-202ENST00000530490 1290 ntBASIC16.53■□□□□ 0.24
PHGDHO43175 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.53■□□□□ 0.24
PHGDHO43175 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.53■□□□□ 0.24
PHGDHO43175 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PHGDHO43175 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.53■□□□□ 0.24
PHGDHO43175 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.53■□□□□ 0.24
PHGDHO43175 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PHGDHO43175 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHGDHO43175 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.53■□□□□ 0.24
PHGDHO43175 AL353732.1-201ENST00000569618 1459 ntBASIC16.53■□□□□ 0.24
PHGDHO43175 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.53■□□□□ 0.24
PHGDHO43175 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.53■□□□□ 0.24
PHGDHO43175 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PHGDHO43175 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PHGDHO43175 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PHGDHO43175 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
PHGDHO43175 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.52■□□□□ 0.24
PHGDHO43175 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PHGDHO43175 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.52■□□□□ 0.24
PHGDHO43175 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PHGDHO43175 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
PHGDHO43175 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PHGDHO43175 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.52■□□□□ 0.24
PHGDHO43175 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.52■□□□□ 0.24
PHGDHO43175 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.52■□□□□ 0.24
PHGDHO43175 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PHGDHO43175 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PHGDHO43175 GPAA1P2-202ENST00000606848 1787 ntBASIC16.52■□□□□ 0.24
PHGDHO43175 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.52■□□□□ 0.24
PHGDHO43175 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.52■□□□□ 0.24
PHGDHO43175 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.52■□□□□ 0.24
PHGDHO43175 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
PHGDHO43175 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PHGDHO43175 DUSP5P1-201ENST00000441325 1139 ntBASIC16.52■□□□□ 0.24
PHGDHO43175 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PHGDHO43175 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.52■□□□□ 0.24
PHGDHO43175 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.52■□□□□ 0.24
PHGDHO43175 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.52■□□□□ 0.24
PHGDHO43175 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PHGDHO43175 TP73-AS1-207ENST00000624167 988 ntBASIC16.52■□□□□ 0.24
PHGDHO43175 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PHGDHO43175 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PHGDHO43175 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.52■□□□□ 0.24
PHGDHO43175 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.52■□□□□ 0.24
PHGDHO43175 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PHGDHO43175 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PHGDHO43175 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
PHGDHO43175 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PHGDHO43175 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PHGDHO43175 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.52■□□□□ 0.23
PHGDHO43175 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PHGDHO43175 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PHGDHO43175 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.52■□□□□ 0.23
PHGDHO43175 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
PHGDHO43175 AC024909.3-201ENST00000611513 2257 ntBASIC16.52■□□□□ 0.23
PHGDHO43175 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PHGDHO43175 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PHGDHO43175 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PHGDHO43175 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.51■□□□□ 0.23
PHGDHO43175 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHGDHO43175 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PHGDHO43175 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PHGDHO43175 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHGDHO43175 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHGDHO43175 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PHGDHO43175 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.51■□□□□ 0.23
PHGDHO43175 AC006449.6-201ENST00000612330 2296 ntBASIC16.51■□□□□ 0.23
PHGDHO43175 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PHGDHO43175 PCGF3-213ENST00000620529 1899 ntBASIC16.51■□□□□ 0.23
PHGDHO43175 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms