Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 AC007967.4-201ENST00000614700 386 ntBASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
TBC1D3FA6NER0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TBC1D3FA6NER0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TBC1D3FA6NER0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 AL353705.2-201ENST00000428243 662 ntBASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 AC002472.2-201ENST00000442739 958 ntBASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 TERF1P3-201ENST00000505638 1227 ntBASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 RNA5SP410-201ENST00000516285 106 ntBASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 RN7SL204P-201ENST00000582831 262 ntBASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 AL139011.1-202ENST00000642063 584 ntBASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 AL645608.8-201ENST00000606034 2086 ntBASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TBC1D3FA6NER0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3FA6NER0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TBC1D3FA6NER0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms