Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 RCN1P2-201ENST00000398357 915 ntBASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 AC022532.1-201ENST00000624563 1728 ntBASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
AP4B1Q9Y6B7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 ME2P1-201ENST00000426028 1970 ntBASIC16■□□□□ 0.15
AP4B1Q9Y6B7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 INTS4P1-201ENST00000438455 1935 ntBASIC16■□□□□ 0.15
AP4B1Q9Y6B7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 COX5BP2-201ENST00000392354 334 ntBASIC16■□□□□ 0.15
AP4B1Q9Y6B7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 AC122714.2-201ENST00000502787 707 ntBASIC16■□□□□ 0.15
AP4B1Q9Y6B7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16■□□□□ 0.15
AP4B1Q9Y6B7 AL732292.2-201ENST00000609649 430 ntBASIC16■□□□□ 0.15
AP4B1Q9Y6B7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
AP4B1Q9Y6B7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 AC013268.4-201ENST00000637413 2228 ntBASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 AC006058.4-201ENST00000624016 1670 ntBASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 IFNL4P1-201ENST00000607083 540 ntBASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4B1Q9Y6B7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms