Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 AL138831.2-201ENST00000606564 490 ntBASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB1Q9Y5G3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 GGT3P-204ENST00000453783 1664 ntBASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGB1Q9Y5G3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 AL021920.2-201ENST00000624828 1351 ntBASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 AL353801.3-201ENST00000609898 542 ntBASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGB1Q9Y5G3 AC116407.4-201ENST00000623319 1061 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms