Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 AC092865.6-201ENST00000642101 219 ntBASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 AC006449.5-201ENST00000610658 2098 ntBASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 AC060834.1-201ENST00000443027 2032 ntBASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGB6Q9Y5F9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 PI4KAP1-204ENST00000612579 1703 ntBASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 AC093525.9-201ENST00000624961 1746 ntBASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 ACTG1P14-201ENST00000446382 1122 ntBASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 DNAJB3-202ENST00000449667 1266 ntBASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 AC010507.1-201ENST00000633895 436 ntBASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 AC005052.1-201ENST00000625181 2492 ntBASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGB6Q9Y5F9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 PKD1P5-201ENST00000532415 10291 ntBASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 RPS8P6-201ENST00000426177 609 ntBASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 HTR5BP-201ENST00000430851 1154 ntBASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 AC124947.2-201ENST00000547118 1133 ntBASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 AC023141.13-201ENST00000604991 943 ntBASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 AC004877.2-201ENST00000623941 599 ntBASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGB6Q9Y5F9 LINC02012-201ENST00000608206 1725 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms