Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 TIMM8BP1-201ENST00000452384 211 ntBASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 KRT18P34-201ENST00000488218 1270 ntBASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 FAM86C2P-203ENST00000528684 1004 ntBASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 AC139530.3-201ENST00000620344 690 ntBASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC4Q9Y5F7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 AKAP8P1-201ENST00000434743 1349 ntBASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 RPS8P6-201ENST00000426177 609 ntBASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 SPDYE11-202ENST00000450699 704 ntBASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 AC243562.1-201ENST00000560672 389 ntBASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 SPDYE9P-201ENST00000570642 692 ntBASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 SPDYE10P-202ENST00000612005 668 ntBASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 SPDYE8P-202ENST00000612377 668 ntBASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 AC105339.1-204ENST00000636249 355 ntBASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 PCGF3-213ENST00000620529 1899 ntBASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGC4Q9Y5F7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGC4Q9Y5F7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 AC004967.1-201ENST00000453589 447 ntBASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 AC079140.1-201ENST00000508039 487 ntBASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.7■□□□□ 0.26
PCDHGC4Q9Y5F7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms