Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTDP1Q9Y5B0 AC141586.5-201ENST00000624546 2050 ntBASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 AL671710.1-201ENST00000610245 2349 ntBASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 AP3S2-216ENST00000617003 1561 ntBASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CTDP1Q9Y5B0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 KRT8P39-201ENST00000396270 1433 ntBASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 AC142381.1-201ENST00000426099 345 ntBASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 AC073389.1-201ENST00000595595 795 ntBASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC19.12■□□□□ 0.65
CTDP1Q9Y5B0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 PCDHB17P-201ENST00000539533 2393 ntBASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 HLA-H-201ENST00000383620 1096 ntBASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 AC097493.3-201ENST00000509725 367 ntBASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 AC138761.1-201ENST00000584393 385 ntBASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTDP1Q9Y5B0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms