Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 AC107918.4-202ENST00000641623 219 ntBASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 AC006504.4-201ENST00000592118 1568 ntBASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 OR2I1P-209ENST00000641730 5365 ntBASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 AF186996.4-201ENST00000467186 377 ntBASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 HLA-J-202ENST00000469281 1241 ntBASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.87□□□□□ -0.03
POLR1DQ9Y2S0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 AL662844.4-201ENST00000606367 2838 ntBASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 AC006277.1-201ENST00000624348 1610 ntBASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 PAWRP1-201ENST00000451083 565 ntBASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 RPS15P9-201ENST00000494093 319 ntBASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 AC136632.2-201ENST00000512891 861 ntBASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms