Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 AC005412.3-201ENST00000580309 715 ntBASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 MIR3197-201ENST00000582241 73 ntBASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA1Q9UND3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 FAM86GP-201ENST00000448322 971 ntBASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 AC012569.1-201ENST00000591191 1524 ntBASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPA1Q9UND3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 AC079140.1-201ENST00000508039 487 ntBASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 DUX4L17-201ENST00000557360 1267 ntBASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 AC093520.2-201ENST00000561830 333 ntBASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA1Q9UND3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms