Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNPO2Q9UMS6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 SPTLC1P1-201ENST00000447199 261 ntBASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 RN7SL618P-201ENST00000477850 296 ntBASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 SERBP1P5-201ENST00000510079 1181 ntBASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 AC010336.2-201ENST00000564226 506 ntBASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNPO2Q9UMS6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
SYNPO2Q9UMS6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
SYNPO2Q9UMS6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
SYNPO2Q9UMS6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SYNPO2Q9UMS6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.89■□□□□ 0.62
SYNPO2Q9UMS6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SYNPO2Q9UMS6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 AL033527.5-202ENST00000641632 1098 ntBASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYNPO2Q9UMS6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms