Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLN8Q9UBY8 AC092865.6-201ENST00000642101 219 ntBASIC14.07□□□□□ -0.16
CLN8Q9UBY8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLN8Q9UBY8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLN8Q9UBY8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLN8Q9UBY8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLN8Q9UBY8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CLN8Q9UBY8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.07□□□□□ -0.16
CLN8Q9UBY8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLN8Q9UBY8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLN8Q9UBY8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLN8Q9UBY8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLN8Q9UBY8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 UPF3AP3-201ENST00000420996 769 ntBASIC14.06□□□□□ -0.16
CLN8Q9UBY8 GPX1P2-201ENST00000429271 606 ntBASIC14.06□□□□□ -0.16
CLN8Q9UBY8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 AC074386.1-202ENST00000463561 864 ntBASIC14.06□□□□□ -0.16
CLN8Q9UBY8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 GPALPP1-207ENST00000611650 899 ntBASIC14.06□□□□□ -0.16
CLN8Q9UBY8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 AL645728.2-201ENST00000641974 660 ntBASIC14.06□□□□□ -0.16
CLN8Q9UBY8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 TOP3BP1-201ENST00000420768 1380 ntBASIC14.06□□□□□ -0.16
CLN8Q9UBY8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CLN8Q9UBY8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 AL603756.1-201ENST00000606511 2163 ntBASIC14.05□□□□□ -0.16
CLN8Q9UBY8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 DUX4L17-201ENST00000557360 1267 ntBASIC14.05□□□□□ -0.16
CLN8Q9UBY8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 REXO1L3P-201ENST00000622202 1288 ntBASIC14.05□□□□□ -0.16
CLN8Q9UBY8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLN8Q9UBY8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms