Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 KLF2P3-201ENST00000451977 1087 ntBASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 AC125807.1-201ENST00000483097 614 ntBASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 AC005498.2-205ENST00000593218 784 ntBASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 MIR6080-201ENST00000617359 66 ntBASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CLCF1Q9UBD9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 HLA-J-202ENST00000469281 1241 ntBASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.71□□□□□ -0.05
CLCF1Q9UBD9 AC012313.1-201ENST00000593393 3059 ntBASIC14.71□□□□□ -0.06
CLCF1Q9UBD9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.71□□□□□ -0.06
CLCF1Q9UBD9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CLCF1Q9UBD9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
CLCF1Q9UBD9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
CLCF1Q9UBD9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLCF1Q9UBD9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms