Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 AC138969.3-201ENST00000546612 1459 ntBASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 AC138932.2-201ENST00000548268 1459 ntBASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 AC126755.4-201ENST00000549796 1459 ntBASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.09■□□□□ 0.33
HCFC1R1Q9NWW0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HCFC1R1Q9NWW0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HCFC1R1Q9NWW0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HCFC1R1Q9NWW0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
HCFC1R1Q9NWW0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.08■□□□□ 0.33
HCFC1R1Q9NWW0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HCFC1R1Q9NWW0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HCFC1R1Q9NWW0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.08■□□□□ 0.33
HCFC1R1Q9NWW0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
HCFC1R1Q9NWW0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.08■□□□□ 0.33
HCFC1R1Q9NWW0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
HCFC1R1Q9NWW0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.08■□□□□ 0.33
HCFC1R1Q9NWW0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 ZNF890P-202ENST00000530367 1156 ntBASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 CHCHD2P3-201ENST00000603038 451 ntBASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HCFC1R1Q9NWW0 GGT4P-201ENST00000623672 1708 ntBASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 BTBD7P1-201ENST00000447253 1453 ntBASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 U91328.1-201ENST00000437528 223 ntBASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 DOC2GP-202ENST00000514950 1163 ntBASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 WASH4P-201ENST00000564273 1246 ntBASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 AC024267.1-201ENST00000582320 895 ntBASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 AC020765.3-201ENST00000613051 740 ntBASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.07■□□□□ 0.32
HCFC1R1Q9NWW0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC1R1Q9NWW0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC1R1Q9NWW0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC1R1Q9NWW0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC1R1Q9NWW0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC1R1Q9NWW0 AL603756.1-201ENST00000606511 2163 ntBASIC17.06■□□□□ 0.32
HCFC1R1Q9NWW0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC1R1Q9NWW0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms