Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 AL596087.1-201ENST00000400979 1969 ntBASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NRIP3Q9NQ35 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 HCG4-201ENST00000418983 998 ntBASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 RPS2P1-201ENST00000434010 821 ntBASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 IFNL4P1-201ENST00000607083 540 ntBASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 AC008667.4-201ENST00000607370 168 ntBASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 AP001350.2-201ENST00000625104 1094 ntBASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 AL365203.3-201ENST00000609742 2057 ntBASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 LINC01144-201ENST00000626198 1710 ntBASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 PCGF3-213ENST00000620529 1899 ntBASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NRIP3Q9NQ35 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 AC073648.2-201ENST00000510116 352 ntBASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 IGHV3-65-201ENST00000523210 341 ntBASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NRIP3Q9NQ35 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.96□□□□□ -0.02
NRIP3Q9NQ35 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.96□□□□□ -0.02
NRIP3Q9NQ35 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NRIP3Q9NQ35 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms