Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MMP28Q9H239 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
MMP28Q9H239 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MMP28Q9H239 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MMP28Q9H239 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MMP28Q9H239 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.73□□□□□ -0.05
MMP28Q9H239 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MMP28Q9H239 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MMP28Q9H239 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MMP28Q9H239 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MMP28Q9H239 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.73□□□□□ -0.05
MMP28Q9H239 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
MMP28Q9H239 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
MMP28Q9H239 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.73□□□□□ -0.05
MMP28Q9H239 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MMP28Q9H239 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MMP28Q9H239 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
MMP28Q9H239 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
MMP28Q9H239 AC026748.1-201ENST00000624349 3251 ntBASIC14.72□□□□□ -0.05
MMP28Q9H239 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
MMP28Q9H239 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.72□□□□□ -0.05
MMP28Q9H239 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.72□□□□□ -0.05
MMP28Q9H239 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.72□□□□□ -0.05
MMP28Q9H239 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.72□□□□□ -0.05
MMP28Q9H239 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.72□□□□□ -0.05
MMP28Q9H239 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.72□□□□□ -0.05
MMP28Q9H239 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 AL645929.1-201ENST00000420084 975 ntBASIC14.72□□□□□ -0.05
MMP28Q9H239 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.72□□□□□ -0.05
MMP28Q9H239 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.72□□□□□ -0.05
MMP28Q9H239 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
MMP28Q9H239 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.72□□□□□ -0.05
MMP28Q9H239 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.72□□□□□ -0.05
MMP28Q9H239 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.72□□□□□ -0.05
MMP28Q9H239 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.72□□□□□ -0.05
MMP28Q9H239 GPR32P1-201ENST00000601788 811 ntBASIC14.72□□□□□ -0.05
MMP28Q9H239 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
MMP28Q9H239 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.72□□□□□ -0.05
MMP28Q9H239 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
MMP28Q9H239 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.72□□□□□ -0.05
MMP28Q9H239 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
MMP28Q9H239 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.72□□□□□ -0.05
MMP28Q9H239 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
MMP28Q9H239 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
MMP28Q9H239 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.72□□□□□ -0.05
MMP28Q9H239 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
MMP28Q9H239 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.72□□□□□ -0.05
MMP28Q9H239 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 AC139749.1-202ENST00000617529 3139 ntBASIC14.72□□□□□ -0.05
MMP28Q9H239 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MMP28Q9H239 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.72□□□□□ -0.05
MMP28Q9H239 BX276092.7-203ENST00000637198 1536 ntBASIC14.71□□□□□ -0.05
MMP28Q9H239 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP28Q9H239 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.71□□□□□ -0.05
MMP28Q9H239 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP28Q9H239 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP28Q9H239 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP28Q9H239 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
MMP28Q9H239 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP28Q9H239 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP28Q9H239 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
MMP28Q9H239 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.71□□□□□ -0.05
MMP28Q9H239 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MMP28Q9H239 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP28Q9H239 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP28Q9H239 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP28Q9H239 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MMP28Q9H239 SPDYE13P-201ENST00000445314 798 ntBASIC14.71□□□□□ -0.05
MMP28Q9H239 AL136038.3-201ENST00000561909 1096 ntBASIC14.71□□□□□ -0.05
MMP28Q9H239 AC004263.2-201ENST00000617183 678 ntBASIC14.71□□□□□ -0.05
MMP28Q9H239 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.71□□□□□ -0.05
MMP28Q9H239 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MMP28Q9H239 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.71□□□□□ -0.05
MMP28Q9H239 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
MMP28Q9H239 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.71□□□□□ -0.05
MMP28Q9H239 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms