Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP4Q9C0A0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNTNAP4Q9C0A0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.58■□□□□ 0.88
CNTNAP4Q9C0A0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNTNAP4Q9C0A0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.58■□□□□ 0.88
CNTNAP4Q9C0A0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CNTNAP4Q9C0A0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 AL442647.2-201ENST00000429864 857 ntBASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 ACTBP11-201ENST00000436287 1126 ntBASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 MIR5189-201ENST00000577370 114 ntBASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 MIR4538-201ENST00000581377 78 ntBASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CNTNAP4Q9C0A0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 FAM8A2P-201ENST00000528813 1142 ntBASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 LINC01115-203ENST00000606068 577 ntBASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 PDIA3P1-201ENST00000471856 1510 ntBASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 U82695.1-201ENST00000635752 1889 ntBASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 AL133338.1-201ENST00000565695 1517 ntBASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP4Q9C0A0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 AL162726.2-201ENST00000438986 1017 ntBASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 AC245100.3-201ENST00000441281 285 ntBASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 EEF1DP4-201ENST00000446006 880 ntBASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 AC036164.1-201ENST00000570544 333 ntBASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP4Q9C0A0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms