Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 AL359736.2-201ENST00000621992 437 ntBASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 AC113410.3-201ENST00000623366 203 ntBASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM3Q9BZL3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 ID1-201ENST00000376105 1233 ntBASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 AC068472.1-201ENST00000474589 881 ntBASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 AC111152.3-201ENST00000569699 673 ntBASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 AC026471.5-201ENST00000615068 467 ntBASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM3Q9BZL3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms