Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 BASP1P1-201ENST00000430708 665 ntBASIC19.25■□□□□ 0.67
SLF1Q9BQI6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 AJ011932.1-201ENST00000621707 465 ntBASIC19.25■□□□□ 0.67
SLF1Q9BQI6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 AL671710.1-201ENST00000610245 2349 ntBASIC19.24■□□□□ 0.67
SLF1Q9BQI6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 FO538757.1-201ENST00000623083 1397 ntBASIC19.24■□□□□ 0.67
SLF1Q9BQI6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 TREML5P-201ENST00000421694 576 ntBASIC19.24■□□□□ 0.67
SLF1Q9BQI6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.24■□□□□ 0.67
SLF1Q9BQI6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 MIR4745-201ENST00000577608 62 ntBASIC19.24■□□□□ 0.67
SLF1Q9BQI6 AC073389.1-201ENST00000595595 795 ntBASIC19.24■□□□□ 0.67
SLF1Q9BQI6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLF1Q9BQI6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 INGX-202ENST00000489074 768 ntBASIC19.23■□□□□ 0.67
SLF1Q9BQI6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SLF1Q9BQI6 UBALD1-205ENST00000590891 2641 ntBASIC19.22■□□□□ 0.67
SLF1Q9BQI6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLF1Q9BQI6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms