Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 AC013467.2-201ENST00000605472 835 ntBASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 AL008721.1-201ENST00000609964 604 ntBASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 SPTSSB-204ENST00000617024 1292 ntBASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 AC073439.1-201ENST00000624121 1774 ntBASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGAP1Q96PV0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 AD000864.1-201ENST00000624076 2295 ntBASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.75■□□□□ 0.59
SYNGAP1Q96PV0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 AL596325.1-201ENST00000563991 1082 ntBASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 AC004233.3-201ENST00000607794 1269 ntBASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 TEX28P1-201ENST00000613479 1221 ntBASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 TEX28P2-201ENST00000617764 1221 ntBASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 MIR6752-201ENST00000618442 71 ntBASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 AC087499.5-201ENST00000452760 1342 ntBASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGAP1Q96PV0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms