Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCNB3Q8WWL7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC25.29■■□□□ 1.64
CCNB3Q8WWL7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC25.29■■□□□ 1.64
CCNB3Q8WWL7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC25.29■■□□□ 1.64
CCNB3Q8WWL7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC25.29■■□□□ 1.64
CCNB3Q8WWL7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC25.29■■□□□ 1.64
CCNB3Q8WWL7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC25.29■■□□□ 1.64
CCNB3Q8WWL7 RNA5-8SN1-201ENST00000610460 153 ntBASIC25.29■■□□□ 1.64
CCNB3Q8WWL7 RNA5-8SN5-202ENST00000612463 153 ntBASIC25.29■■□□□ 1.64
CCNB3Q8WWL7 RNA5-8SN4-201ENST00000613359 153 ntBASIC25.29■■□□□ 1.64
CCNB3Q8WWL7 RNA5-8SN5-201ENST00000619471 153 ntBASIC25.29■■□□□ 1.64
CCNB3Q8WWL7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCNB3Q8WWL7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCNB3Q8WWL7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCNB3Q8WWL7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 AD000864.1-201ENST00000624076 2295 ntBASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 FLJ38576-201ENST00000623820 2459 ntBASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 AC093724.1-201ENST00000448659 1027 ntBASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 AC004790.1-201ENST00000612686 536 ntBASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC25.28■■□□□ 1.64
CCNB3Q8WWL7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCNB3Q8WWL7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.64
CCNB3Q8WWL7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 AC020916.1-201ENST00000587762 1774 ntBASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
CCNB3Q8WWL7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 AC011676.5-201ENST00000624864 2660 ntBASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 API5-211ENST00000534695 560 ntTSL 5 BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 AL512361.1-201ENST00000554200 418 ntBASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 AC010336.2-201ENST00000564226 506 ntBASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms