Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 UFM1-202ENST00000379649 846 ntTSL 4 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 AC074338.1-201ENST00000416825 156 ntBASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 BX284668.4-201ENST00000453917 508 ntBASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 AC138951.2-201ENST00000623455 1161 ntBASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ALMS1Q8TCU4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 ABALON-201ENST00000629058 1903 ntBASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 SLC25A24P2-201ENST00000415059 510 ntBASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 NUS1P3-201ENST00000423502 862 ntBASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 ADM-202ENST00000524948 584 ntTSL 2 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 RHOXF1P1-202ENST00000635473 501 ntBASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 AC018735.1-201ENST00000437208 1502 ntBASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 HADH-212ENST00000638621 741 ntTSL 5 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 AC138028.6-201ENST00000616106 1482 ntBASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 FAM197Y7-201ENST00000432892 766 ntBASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC10.94□□□□□ -0.66
ALMS1Q8TCU4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 AC106872.11-201ENST00000605838 421 ntBASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ALMS1Q8TCU4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms