Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 AC093724.1-201ENST00000448659 1027 ntBASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 POU5F1P6-201ENST00000466990 990 ntBASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 AC079140.1-201ENST00000508039 487 ntBASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 AC105339.1-204ENST00000636249 355 ntBASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 AC124067.4-201ENST00000519691 2379 ntBASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 PCDHB19P-201ENST00000570871 2371 ntBASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 AC092364.2-201ENST00000596710 2692 ntBASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
ZIC4Q8N9L1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 SPCS2P4-201ENST00000436160 681 ntBASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 SPDYE11-202ENST00000450699 704 ntBASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 RN7SL589P-201ENST00000481268 310 ntBASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 SPDYE9P-201ENST00000570642 692 ntBASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 SPDYE10P-202ENST00000612005 668 ntBASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 SPDYE8P-202ENST00000612377 668 ntBASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.62□□□□□ -0.07
ZIC4Q8N9L1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms