Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RNF135Q8IUD6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF135Q8IUD6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF135Q8IUD6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.58■□□□□ 0.41
RNF135Q8IUD6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF135Q8IUD6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF135Q8IUD6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF135Q8IUD6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF135Q8IUD6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF135Q8IUD6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF135Q8IUD6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 GIMAP3P-201ENST00000495150 836 ntBASIC17.58■□□□□ 0.4
RNF135Q8IUD6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 AC107918.2-201ENST00000530817 355 ntBASIC17.58■□□□□ 0.4
RNF135Q8IUD6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF135Q8IUD6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 AC138969.3-201ENST00000546612 1459 ntBASIC17.57■□□□□ 0.4
RNF135Q8IUD6 AC138932.2-201ENST00000548268 1459 ntBASIC17.57■□□□□ 0.4
RNF135Q8IUD6 AC126755.4-201ENST00000549796 1459 ntBASIC17.57■□□□□ 0.4
RNF135Q8IUD6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 HMGA1P7-201ENST00000406908 502 ntBASIC17.57■□□□□ 0.4
RNF135Q8IUD6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 AL009183.1-201ENST00000603760 355 ntBASIC17.57■□□□□ 0.4
RNF135Q8IUD6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.57■□□□□ 0.4
RNF135Q8IUD6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 AL138688.1-201ENST00000624851 1594 ntBASIC17.57■□□□□ 0.4
RNF135Q8IUD6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF135Q8IUD6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF135Q8IUD6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms