Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 VN2R19P-201ENST00000442399 1052 ntBASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 AC092865.5-201ENST00000545435 363 ntBASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 AC040169.1-201ENST00000565382 521 ntBASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 AC064836.3-201ENST00000607928 673 ntBASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 AL138688.1-201ENST00000624851 1594 ntBASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CHMP1BQ7LBR1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 AL121761.2-201ENST00000598007 1648 ntBASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CHMP1BQ7LBR1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP1BQ7LBR1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.38■□□□□ 0.05
CHMP1BQ7LBR1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP1BQ7LBR1 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CHMP1BQ7LBR1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP1BQ7LBR1 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP1BQ7LBR1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.38■□□□□ 0.05
CHMP1BQ7LBR1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.38■□□□□ 0.05
CHMP1BQ7LBR1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP1BQ7LBR1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP1BQ7LBR1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP1BQ7LBR1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP1BQ7LBR1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP1BQ7LBR1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP1BQ7LBR1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms