Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 AC073592.5-201ENST00000624854 528 ntBASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 AL049757.1-201ENST00000616842 1596 ntBASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 TSPY19P-201ENST00000418461 509 ntBASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 TSPY18P-201ENST00000441642 509 ntBASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 ABCD1P5-201ENST00000445663 754 ntBASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 AL353593.2-201ENST00000602529 1483 ntBASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 AD001527.2-201ENST00000622994 785 ntBASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM53Q6P2H8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 AL365203.3-201ENST00000609742 2057 ntBASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms