Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.58□□□□□ -0.4
MRPL54Q6P161 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 SLC25A1P2-201ENST00000430693 912 ntBASIC12.58□□□□□ -0.4
MRPL54Q6P161 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 AC116562.2-201ENST00000507042 360 ntBASIC12.58□□□□□ -0.4
MRPL54Q6P161 BX088651.1-201ENST00000540551 451 ntBASIC12.58□□□□□ -0.4
MRPL54Q6P161 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 AC024563.2-201ENST00000603282 481 ntBASIC12.58□□□□□ -0.4
MRPL54Q6P161 GRAMD4P8-201ENST00000605465 1115 ntBASIC12.58□□□□□ -0.4
MRPL54Q6P161 CD177P1-201ENST00000606252 935 ntBASIC12.58□□□□□ -0.4
MRPL54Q6P161 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 AC106881.1-201ENST00000605849 3329 ntBASIC12.58□□□□□ -0.4
MRPL54Q6P161 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 AC023908.3-201ENST00000564211 3047 ntBASIC12.58□□□□□ -0.4
MRPL54Q6P161 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 AC096633.1-201ENST00000422446 749 ntBASIC12.57□□□□□ -0.4
MRPL54Q6P161 SAPCD2P4-201ENST00000424595 1171 ntBASIC12.57□□□□□ -0.4
MRPL54Q6P161 NUDT16P1-203ENST00000513809 620 ntBASIC12.57□□□□□ -0.4
MRPL54Q6P161 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 MIR5787-201ENST00000611784 55 ntBASIC12.57□□□□□ -0.4
MRPL54Q6P161 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 AL157888.1-201ENST00000631930 593 ntBASIC12.57□□□□□ -0.4
MRPL54Q6P161 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL54Q6P161 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.57□□□□□ -0.4
MRPL54Q6P161 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL54Q6P161 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.56□□□□□ -0.4
MRPL54Q6P161 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms