Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 SLC25A39P2-201ENST00000537614 270 ntBASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 AC026150.2-201ENST00000564693 1156 ntBASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 AC051619.7-201ENST00000568314 623 ntBASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 AC093512.1-201ENST00000617969 520 ntBASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 AL136317.3-201ENST00000618497 906 ntBASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 AL162727.3-201ENST00000635661 2787 ntBASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
H3F3CQ6NXT2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.33■□□□□ 0.05
H3F3CQ6NXT2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
H3F3CQ6NXT2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
H3F3CQ6NXT2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
H3F3CQ6NXT2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.33■□□□□ 0.05
H3F3CQ6NXT2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
H3F3CQ6NXT2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
H3F3CQ6NXT2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
H3F3CQ6NXT2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
H3F3CQ6NXT2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 SPDYE14P-201ENST00000442619 822 ntBASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 AC105233.2-201ENST00000523697 349 ntBASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 AF228730.5-201ENST00000530288 346 ntBASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 ALG1L8P-201ENST00000533887 760 ntBASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
H3F3CQ6NXT2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 AL671710.1-201ENST00000610245 2349 ntBASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 SPDYE7P-202ENST00000420373 878 ntBASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.32■□□□□ 0.04
H3F3CQ6NXT2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms