Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.06■□□□□ 0.16
RNF220Q5VTB9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RNF220Q5VTB9 STK25P1-201ENST00000585406 838 ntBASIC16.06■□□□□ 0.16
RNF220Q5VTB9 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
RNF220Q5VTB9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF220Q5VTB9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RNF220Q5VTB9 AC011467.2-201ENST00000598425 242 ntBASIC16.06■□□□□ 0.16
RNF220Q5VTB9 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF220Q5VTB9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF220Q5VTB9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF220Q5VTB9 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF220Q5VTB9 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF220Q5VTB9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF220Q5VTB9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 KRT8P10-201ENST00000450021 1447 ntBASIC16.05■□□□□ 0.16
RNF220Q5VTB9 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 SLC25A1P3-201ENST00000395415 828 ntBASIC16.05■□□□□ 0.16
RNF220Q5VTB9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 PCED1CP-201ENST00000419887 785 ntBASIC16.05■□□□□ 0.16
RNF220Q5VTB9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 AP005901.3-202ENST00000581653 237 ntBASIC16.05■□□□□ 0.16
RNF220Q5VTB9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF220Q5VTB9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 IER3-202ENST00000376377 1350 ntBASIC16.04■□□□□ 0.16
RNF220Q5VTB9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 AC233702.3-201ENST00000578656 1387 ntBASIC16.04■□□□□ 0.16
RNF220Q5VTB9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 KRT18P1-202ENST00000452408 1331 ntBASIC16.04■□□□□ 0.16
RNF220Q5VTB9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 TPSP2-201ENST00000561760 610 ntBASIC16.04■□□□□ 0.16
RNF220Q5VTB9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 AC087388.1-201ENST00000571370 1112 ntBASIC16.04■□□□□ 0.16
RNF220Q5VTB9 Z69720.1-201ENST00000601483 472 ntBASIC16.04■□□□□ 0.16
RNF220Q5VTB9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 AC010491.1-201ENST00000563101 2797 ntBASIC16.04■□□□□ 0.16
RNF220Q5VTB9 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF220Q5VTB9 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms