Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFX4Q33E94 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.5■□□□□ 0.07
RFX4Q33E94 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.5■□□□□ 0.07
RFX4Q33E94 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.5■□□□□ 0.07
RFX4Q33E94 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.5■□□□□ 0.07
RFX4Q33E94 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.5■□□□□ 0.07
RFX4Q33E94 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.5■□□□□ 0.07
RFX4Q33E94 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.5■□□□□ 0.07
RFX4Q33E94 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
RFX4Q33E94 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFX4Q33E94 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.5■□□□□ 0.07
RFX4Q33E94 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RFX4Q33E94 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.5■□□□□ 0.07
RFX4Q33E94 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RFX4Q33E94 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFX4Q33E94 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFX4Q33E94 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFX4Q33E94 KRT8P49-201ENST00000604166 1432 ntBASIC15.5■□□□□ 0.07
RFX4Q33E94 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.5■□□□□ 0.07
RFX4Q33E94 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RFX4Q33E94 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.5■□□□□ 0.07
RFX4Q33E94 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RFX4Q33E94 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.49■□□□□ 0.07
RFX4Q33E94 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.49■□□□□ 0.07
RFX4Q33E94 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.49■□□□□ 0.07
RFX4Q33E94 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.49■□□□□ 0.07
RFX4Q33E94 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.49■□□□□ 0.07
RFX4Q33E94 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.49■□□□□ 0.07
RFX4Q33E94 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.49■□□□□ 0.07
RFX4Q33E94 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.49■□□□□ 0.07
RFX4Q33E94 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.49■□□□□ 0.07
RFX4Q33E94 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RFX4Q33E94 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RFX4Q33E94 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.49■□□□□ 0.07
RFX4Q33E94 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.49■□□□□ 0.07
RFX4Q33E94 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RFX4Q33E94 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.49■□□□□ 0.07
RFX4Q33E94 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
RFX4Q33E94 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFX4Q33E94 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX4Q33E94 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX4Q33E94 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
RFX4Q33E94 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.48■□□□□ 0.07
RFX4Q33E94 AC005332.1-201ENST00000577698 1310 ntBASIC15.48■□□□□ 0.07
RFX4Q33E94 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.48■□□□□ 0.07
RFX4Q33E94 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX4Q33E94 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX4Q33E94 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RFX4Q33E94 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.48■□□□□ 0.07
RFX4Q33E94 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX4Q33E94 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX4Q33E94 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX4Q33E94 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
RFX4Q33E94 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX4Q33E94 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RFX4Q33E94 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.48■□□□□ 0.07
RFX4Q33E94 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX4Q33E94 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RFX4Q33E94 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.48■□□□□ 0.07
RFX4Q33E94 ACTG1P4-201ENST00000425123 1122 ntBASIC15.48■□□□□ 0.07
RFX4Q33E94 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.48■□□□□ 0.07
RFX4Q33E94 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.48■□□□□ 0.07
RFX4Q33E94 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.48■□□□□ 0.07
RFX4Q33E94 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RFX4Q33E94 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX4Q33E94 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX4Q33E94 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX4Q33E94 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.48■□□□□ 0.07
RFX4Q33E94 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX4Q33E94 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
RFX4Q33E94 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.48■□□□□ 0.07
RFX4Q33E94 INTS4P1-201ENST00000438455 1935 ntBASIC15.48■□□□□ 0.07
RFX4Q33E94 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.48■□□□□ 0.07
RFX4Q33E94 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.48■□□□□ 0.07
RFX4Q33E94 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFX4Q33E94 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFX4Q33E94 AC233702.3-201ENST00000578656 1387 ntBASIC15.48■□□□□ 0.07
RFX4Q33E94 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.48■□□□□ 0.07
RFX4Q33E94 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms