Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CDR2Q01850 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.71■□□□□ 0.43
CDR2Q01850 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.71■□□□□ 0.43
CDR2Q01850 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.71■□□□□ 0.43
CDR2Q01850 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.71■□□□□ 0.43
CDR2Q01850 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDR2Q01850 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDR2Q01850 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDR2Q01850 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDR2Q01850 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.71■□□□□ 0.43
CDR2Q01850 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.71■□□□□ 0.42
CDR2Q01850 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CDR2Q01850 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDR2Q01850 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CDR2Q01850 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.7■□□□□ 0.42
CDR2Q01850 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.7■□□□□ 0.42
CDR2Q01850 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
CDR2Q01850 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDR2Q01850 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 HMGA1P7-201ENST00000406908 502 ntBASIC17.7■□□□□ 0.42
CDR2Q01850 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 CRYGEP-201ENST00000412192 528 ntBASIC17.7■□□□□ 0.42
CDR2Q01850 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CDR2Q01850 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.7■□□□□ 0.42
CDR2Q01850 HCG4B-203ENST00000450128 991 ntBASIC17.7■□□□□ 0.42
CDR2Q01850 AL513480.1-201ENST00000451731 511 ntBASIC17.7■□□□□ 0.42
CDR2Q01850 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.7■□□□□ 0.42
CDR2Q01850 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CDR2Q01850 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.7■□□□□ 0.42
CDR2Q01850 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.7■□□□□ 0.42
CDR2Q01850 AL645728.2-201ENST00000641974 660 ntBASIC17.7■□□□□ 0.42
CDR2Q01850 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDR2Q01850 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.7■□□□□ 0.42
CDR2Q01850 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
CDR2Q01850 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.7■□□□□ 0.42
CDR2Q01850 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.7■□□□□ 0.42
CDR2Q01850 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.7■□□□□ 0.42
CDR2Q01850 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
CDR2Q01850 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDR2Q01850 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.69■□□□□ 0.42
CDR2Q01850 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDR2Q01850 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDR2Q01850 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CDR2Q01850 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.69■□□□□ 0.42
CDR2Q01850 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.69■□□□□ 0.42
CDR2Q01850 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.69■□□□□ 0.42
CDR2Q01850 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CDR2Q01850 RNU1-129P-201ENST00000384064 167 ntBASIC17.69■□□□□ 0.42
CDR2Q01850 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDR2Q01850 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CDR2Q01850 POU5F1P6-201ENST00000466990 990 ntBASIC17.69■□□□□ 0.42
CDR2Q01850 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.69■□□□□ 0.42
CDR2Q01850 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.69■□□□□ 0.42
CDR2Q01850 U1.21-201ENST00000580816 167 ntBASIC17.69■□□□□ 0.42
CDR2Q01850 AC020765.3-201ENST00000613051 740 ntBASIC17.69■□□□□ 0.42
CDR2Q01850 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.69■□□□□ 0.42
CDR2Q01850 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDR2Q01850 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.69■□□□□ 0.42
CDR2Q01850 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDR2Q01850 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDR2Q01850 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDR2Q01850 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.68■□□□□ 0.42
CDR2Q01850 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDR2Q01850 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDR2Q01850 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDR2Q01850 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDR2Q01850 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms