Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.78■□□□□ 0.28
PRAMEP78395 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PRAMEP78395 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.78■□□□□ 0.28
PRAMEP78395 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEP78395 AL596257.1-201ENST00000641463 2694 ntBASIC16.78■□□□□ 0.28
PRAMEP78395 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEP78395 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.78■□□□□ 0.28
PRAMEP78395 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEP78395 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
PRAMEP78395 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PRAMEP78395 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PRAMEP78395 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEP78395 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEP78395 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEP78395 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.78■□□□□ 0.28
PRAMEP78395 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PRAMEP78395 MRPL3P1-201ENST00000400109 1033 ntBASIC16.78■□□□□ 0.28
PRAMEP78395 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEP78395 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PRAMEP78395 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.78■□□□□ 0.28
PRAMEP78395 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.78■□□□□ 0.28
PRAMEP78395 HCG4-201ENST00000418983 998 ntBASIC16.78■□□□□ 0.28
PRAMEP78395 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
PRAMEP78395 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
PRAMEP78395 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PRAMEP78395 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.78■□□□□ 0.28
PRAMEP78395 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.78■□□□□ 0.28
PRAMEP78395 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PRAMEP78395 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
PRAMEP78395 CYP2A7P1-201ENST00000595391 815 ntBASIC16.78■□□□□ 0.28
PRAMEP78395 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.78■□□□□ 0.28
PRAMEP78395 AC010654.1-201ENST00000615722 808 ntBASIC16.78■□□□□ 0.28
PRAMEP78395 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.78■□□□□ 0.28
PRAMEP78395 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.78■□□□□ 0.28
PRAMEP78395 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEP78395 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PRAMEP78395 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEP78395 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEP78395 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEP78395 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.78■□□□□ 0.28
PRAMEP78395 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEP78395 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PRAMEP78395 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEP78395 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEP78395 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
PRAMEP78395 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEP78395 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PRAMEP78395 AL662844.4-201ENST00000606367 2838 ntBASIC16.78■□□□□ 0.28
PRAMEP78395 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRAMEP78395 AL671710.1-201ENST00000610245 2349 ntBASIC16.78■□□□□ 0.28
PRAMEP78395 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEP78395 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEP78395 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.77■□□□□ 0.28
PRAMEP78395 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEP78395 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEP78395 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PRAMEP78395 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.77■□□□□ 0.28
PRAMEP78395 AC068418.2-201ENST00000577309 3703 ntBASIC16.77■□□□□ 0.28
PRAMEP78395 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
PRAMEP78395 ALOX12P2-203ENST00000570921 1945 ntBASIC16.77■□□□□ 0.28
PRAMEP78395 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PRAMEP78395 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEP78395 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEP78395 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.77■□□□□ 0.28
PRAMEP78395 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.77■□□□□ 0.28
PRAMEP78395 AC098831.1-202ENST00000438821 336 ntBASIC16.77■□□□□ 0.28
PRAMEP78395 AC108751.1-201ENST00000490852 363 ntBASIC16.77■□□□□ 0.28
PRAMEP78395 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.77■□□□□ 0.28
PRAMEP78395 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.77■□□□□ 0.28
PRAMEP78395 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.77■□□□□ 0.28
PRAMEP78395 AC116407.3-201ENST00000623905 1129 ntBASIC16.77■□□□□ 0.28
PRAMEP78395 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEP78395 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRAMEP78395 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.77■□□□□ 0.28
PRAMEP78395 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.77■□□□□ 0.28
PRAMEP78395 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PRAMEP78395 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.77■□□□□ 0.28
PRAMEP78395 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PRAMEP78395 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.77■□□□□ 0.27
PRAMEP78395 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRAMEP78395 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRAMEP78395 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
PRAMEP78395 KRT8P39-201ENST00000396270 1433 ntBASIC16.77■□□□□ 0.27
PRAMEP78395 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.77■□□□□ 0.27
PRAMEP78395 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRAMEP78395 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PRAMEP78395 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRAMEP78395 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRAMEP78395 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.77■□□□□ 0.27
PRAMEP78395 SNX33P1-201ENST00000592116 1762 ntBASIC16.77■□□□□ 0.27
PRAMEP78395 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.77■□□□□ 0.27
PRAMEP78395 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
PRAMEP78395 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PRAMEP78395 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PRAMEP78395 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.76■□□□□ 0.27
PRAMEP78395 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.76■□□□□ 0.27
PRAMEP78395 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms