Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LINC01711-201ENST00000598340 967 ntBASIC16.28■□□□□ 0.2
CDH13P55290 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
CDH13P55290 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH13P55290 AC107918.4-202ENST00000641623 219 ntBASIC16.28■□□□□ 0.2
CDH13P55290 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH13P55290 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH13P55290 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH13P55290 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH13P55290 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH13P55290 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH13P55290 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH13P55290 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH13P55290 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH13P55290 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH13P55290 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CDH13P55290 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH13P55290 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH13P55290 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH13P55290 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH13P55290 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDH13P55290 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH13P55290 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
CDH13P55290 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH13P55290 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDH13P55290 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH13P55290 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.27■□□□□ 0.2
CDH13P55290 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH13P55290 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH13P55290 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDH13P55290 LAGE3P1-201ENST00000425356 484 ntBASIC16.27■□□□□ 0.2
CDH13P55290 RPS2P1-201ENST00000434010 821 ntBASIC16.27■□□□□ 0.2
CDH13P55290 AC107918.2-201ENST00000530817 355 ntBASIC16.27■□□□□ 0.2
CDH13P55290 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH13P55290 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH13P55290 AC006557.2-201ENST00000592985 1240 ntBASIC16.27■□□□□ 0.2
CDH13P55290 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH13P55290 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH13P55290 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
CDH13P55290 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH13P55290 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH13P55290 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH13P55290 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.27■□□□□ 0.19
CDH13P55290 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDH13P55290 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.27■□□□□ 0.19
CDH13P55290 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CDH13P55290 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.27■□□□□ 0.19
CDH13P55290 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CDH13P55290 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDH13P55290 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDH13P55290 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH13P55290 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH13P55290 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CDH13P55290 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
CDH13P55290 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH13P55290 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CDH13P55290 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH13P55290 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH13P55290 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH13P55290 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH13P55290 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH13P55290 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH13P55290 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH13P55290 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH13P55290 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDH13P55290 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH13P55290 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH13P55290 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH13P55290 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CDH13P55290 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH13P55290 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH13P55290 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH13P55290 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH13P55290 RPS15P9-201ENST00000494093 319 ntBASIC16.26■□□□□ 0.19
CDH13P55290 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH13P55290 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH13P55290 AC091167.2-201ENST00000579581 588 ntBASIC16.26■□□□□ 0.19
CDH13P55290 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH13P55290 CYP2A7P1-201ENST00000595391 815 ntBASIC16.26■□□□□ 0.19
CDH13P55290 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.26■□□□□ 0.19
CDH13P55290 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH13P55290 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH13P55290 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH13P55290 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH13P55290 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH13P55290 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH13P55290 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH13P55290 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH13P55290 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH13P55290 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH13P55290 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH13P55290 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH13P55290 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDH13P55290 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH13P55290 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms