Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PMS1P54277 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.25■□□□□ 0.51
PMS1P54277 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PMS1P54277 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.25■□□□□ 0.51
PMS1P54277 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PMS1P54277 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PMS1P54277 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
PMS1P54277 RNA5SP415-201ENST00000517246 115 ntBASIC18.25■□□□□ 0.51
PMS1P54277 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PMS1P54277 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.25■□□□□ 0.51
PMS1P54277 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.25■□□□□ 0.51
PMS1P54277 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
PMS1P54277 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PMS1P54277 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PMS1P54277 HLA-A-201ENST00000376802 1334 ntBASIC18.24■□□□□ 0.51
PMS1P54277 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PMS1P54277 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
PMS1P54277 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PMS1P54277 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PMS1P54277 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.24■□□□□ 0.51
PMS1P54277 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PMS1P54277 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PMS1P54277 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PMS1P54277 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PMS1P54277 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PMS1P54277 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PMS1P54277 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PMS1P54277 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.24■□□□□ 0.51
PMS1P54277 RNU1-129P-201ENST00000384064 167 ntBASIC18.24■□□□□ 0.51
PMS1P54277 VN2R19P-201ENST00000442399 1052 ntBASIC18.24■□□□□ 0.51
PMS1P54277 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.24■□□□□ 0.51
PMS1P54277 HCG4B-203ENST00000450128 991 ntBASIC18.24■□□□□ 0.51
PMS1P54277 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PMS1P54277 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.24■□□□□ 0.51
PMS1P54277 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.24■□□□□ 0.51
PMS1P54277 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.24■□□□□ 0.51
PMS1P54277 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PMS1P54277 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
PMS1P54277 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.24■□□□□ 0.51
PMS1P54277 U1.21-201ENST00000580816 167 ntBASIC18.24■□□□□ 0.51
PMS1P54277 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.24■□□□□ 0.51
PMS1P54277 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PMS1P54277 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.24■□□□□ 0.51
PMS1P54277 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.24■□□□□ 0.51
PMS1P54277 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PMS1P54277 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PMS1P54277 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PMS1P54277 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PMS1P54277 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PMS1P54277 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.23■□□□□ 0.51
PMS1P54277 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.23■□□□□ 0.51
PMS1P54277 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.23■□□□□ 0.51
PMS1P54277 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PMS1P54277 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.23■□□□□ 0.51
PMS1P54277 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.23■□□□□ 0.51
PMS1P54277 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.23■□□□□ 0.51
PMS1P54277 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.23■□□□□ 0.51
PMS1P54277 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.23■□□□□ 0.51
PMS1P54277 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.23■□□□□ 0.51
PMS1P54277 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.23■□□□□ 0.51
PMS1P54277 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
PMS1P54277 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.23■□□□□ 0.51
PMS1P54277 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PMS1P54277 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PMS1P54277 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.23■□□□□ 0.51
PMS1P54277 AP001005.1-201ENST00000571755 1248 ntBASIC18.23■□□□□ 0.51
PMS1P54277 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.23■□□□□ 0.51
PMS1P54277 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.23■□□□□ 0.51
PMS1P54277 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.23■□□□□ 0.51
PMS1P54277 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PMS1P54277 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.23■□□□□ 0.51
PMS1P54277 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.22■□□□□ 0.51
PMS1P54277 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms