Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBP50607 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBP50607 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBP50607 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBP50607 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBP50607 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBP50607 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.5■□□□□ 0.39
TUBP50607 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBP50607 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TUBP50607 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBP50607 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBP50607 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBP50607 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBP50607 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TUBP50607 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.5■□□□□ 0.39
TUBP50607 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.5■□□□□ 0.39
TUBP50607 CYP2A7P1-201ENST00000595391 815 ntBASIC17.5■□□□□ 0.39
TUBP50607 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBP50607 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBP50607 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBP50607 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBP50607 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBP50607 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TUBP50607 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBP50607 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TUBP50607 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBP50607 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBP50607 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.5■□□□□ 0.39
TUBP50607 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBP50607 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBP50607 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.49■□□□□ 0.39
TUBP50607 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TUBP50607 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
TUBP50607 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TUBP50607 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 TFAMP1-201ENST00000412727 736 ntBASIC17.49■□□□□ 0.39
TUBP50607 SPDYE11-202ENST00000450699 704 ntBASIC17.49■□□□□ 0.39
TUBP50607 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.49■□□□□ 0.39
TUBP50607 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TUBP50607 AL135744.1-201ENST00000565098 629 ntBASIC17.49■□□□□ 0.39
TUBP50607 SPDYE9P-201ENST00000570642 692 ntBASIC17.49■□□□□ 0.39
TUBP50607 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 AC013467.2-201ENST00000605472 835 ntBASIC17.49■□□□□ 0.39
TUBP50607 SPDYE10P-202ENST00000612005 668 ntBASIC17.49■□□□□ 0.39
TUBP50607 SPDYE8P-202ENST00000612377 668 ntBASIC17.49■□□□□ 0.39
TUBP50607 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.49■□□□□ 0.39
TUBP50607 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.49■□□□□ 0.39
TUBP50607 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TUBP50607 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.49■□□□□ 0.39
TUBP50607 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
TUBP50607 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TUBP50607 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TUBP50607 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.49■□□□□ 0.39
TUBP50607 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.49■□□□□ 0.39
TUBP50607 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TUBP50607 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.48■□□□□ 0.39
TUBP50607 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TUBP50607 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TUBP50607 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.48■□□□□ 0.39
TUBP50607 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TUBP50607 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
TUBP50607 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.48■□□□□ 0.39
TUBP50607 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.48■□□□□ 0.39
TUBP50607 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TUBP50607 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TUBP50607 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TUBP50607 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TUBP50607 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TUBP50607 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TUBP50607 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TUBP50607 METTL21AP1-201ENST00000438852 635 ntBASIC17.48■□□□□ 0.39
TUBP50607 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TUBP50607 TIMM8BP1-201ENST00000452384 211 ntBASIC17.48■□□□□ 0.39
TUBP50607 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.48■□□□□ 0.39
TUBP50607 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms