Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CENPAP49450 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.13■□□□□ 0.01
CENPAP49450 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CENPAP49450 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CENPAP49450 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.12■□□□□ 0.01
CENPAP49450 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.12■□□□□ 0.01
CENPAP49450 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CENPAP49450 AL391256.1-201ENST00000443260 1855 ntBASIC15.12■□□□□ 0.01
CENPAP49450 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.12■□□□□ 0.01
CENPAP49450 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.12■□□□□ 0.01
CENPAP49450 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CENPAP49450 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.12■□□□□ 0.01
CENPAP49450 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.12■□□□□ 0.01
CENPAP49450 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.12■□□□□ 0.01
CENPAP49450 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.12■□□□□ 0.01
CENPAP49450 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.12■□□□□ 0.01
CENPAP49450 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CENPAP49450 MTDHP3-201ENST00000594186 672 ntBASIC15.12■□□□□ 0.01
CENPAP49450 AC064862.7-201ENST00000604520 867 ntBASIC15.12■□□□□ 0.01
CENPAP49450 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CENPAP49450 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CENPAP49450 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CENPAP49450 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.12■□□□□ 0.01
CENPAP49450 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CENPAP49450 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
CENPAP49450 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
CENPAP49450 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.12■□□□□ 0.01
CENPAP49450 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CENPAP49450 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.12■□□□□ 0.01
CENPAP49450 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.11■□□□□ 0.01
CENPAP49450 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.11■□□□□ 0.01
CENPAP49450 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CENPAP49450 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CENPAP49450 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CENPAP49450 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CENPAP49450 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.11■□□□□ 0.01
CENPAP49450 PRELID1P1-202ENST00000567272 903 ntBASIC15.11■□□□□ 0.01
CENPAP49450 NKAPP1-205ENST00000585790 367 ntBASIC15.11■□□□□ 0.01
CENPAP49450 AL121772.3-201ENST00000610840 674 ntBASIC15.11■□□□□ 0.01
CENPAP49450 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.11■□□□□ 0.01
CENPAP49450 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CENPAP49450 AL022326.1-202ENST00000641533 845 ntBASIC15.11■□□□□ 0.01
CENPAP49450 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.11■□□□□ 0.01
CENPAP49450 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.11■□□□□ 0.01
CENPAP49450 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.11■□□□□ 0.01
CENPAP49450 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
CENPAP49450 AL645728.1-201ENST00000366221 2101 ntBASIC15.11■□□□□ 0.01
CENPAP49450 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.11■□□□□ 0.01
CENPAP49450 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 PCDHA3-202ENST00000532566 4594 ntBASIC15.11■□□□□ 0.01
CENPAP49450 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CENPAP49450 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CENPAP49450 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CENPAP49450 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CENPAP49450 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CENPAP49450 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.11■□□□□ 0.01
CENPAP49450 AC243591.1-201ENST00000452967 1364 ntBASIC15.11■□□□□ 0.01
CENPAP49450 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.11■□□□□ 0.01
CENPAP49450 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CENPAP49450 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms