Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARCN1P48444 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARCN1P48444 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.62■□□□□ 0.25
ARCN1P48444 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARCN1P48444 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
ARCN1P48444 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.62■□□□□ 0.25
ARCN1P48444 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ARCN1P48444 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARCN1P48444 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARCN1P48444 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARCN1P48444 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARCN1P48444 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARCN1P48444 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.62■□□□□ 0.25
ARCN1P48444 HMGA1P7-201ENST00000406908 502 ntBASIC16.62■□□□□ 0.25
ARCN1P48444 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.62■□□□□ 0.25
ARCN1P48444 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.62■□□□□ 0.25
ARCN1P48444 VN2R19P-201ENST00000442399 1052 ntBASIC16.62■□□□□ 0.25
ARCN1P48444 KRT18P3-201ENST00000451602 1288 ntBASIC16.62■□□□□ 0.25
ARCN1P48444 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
ARCN1P48444 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.62■□□□□ 0.25
ARCN1P48444 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.62■□□□□ 0.25
ARCN1P48444 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.62■□□□□ 0.25
ARCN1P48444 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARCN1P48444 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.62■□□□□ 0.25
ARCN1P48444 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARCN1P48444 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARCN1P48444 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARCN1P48444 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.62■□□□□ 0.25
ARCN1P48444 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARCN1P48444 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ARCN1P48444 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARCN1P48444 AL596087.1-201ENST00000400979 1969 ntBASIC16.62■□□□□ 0.25
ARCN1P48444 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.62■□□□□ 0.25
ARCN1P48444 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARCN1P48444 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.62■□□□□ 0.25
ARCN1P48444 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.62■□□□□ 0.25
ARCN1P48444 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARCN1P48444 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ARCN1P48444 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ARCN1P48444 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 AC008894.3-201ENST00000624324 3103 ntBASIC16.61■□□□□ 0.25
ARCN1P48444 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ARCN1P48444 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ARCN1P48444 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ARCN1P48444 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.61■□□□□ 0.25
ARCN1P48444 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
ARCN1P48444 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.61■□□□□ 0.25
ARCN1P48444 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.61■□□□□ 0.25
ARCN1P48444 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.61■□□□□ 0.25
ARCN1P48444 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.61■□□□□ 0.25
ARCN1P48444 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.61■□□□□ 0.25
ARCN1P48444 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.61■□□□□ 0.25
ARCN1P48444 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.61■□□□□ 0.25
ARCN1P48444 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.61■□□□□ 0.25
ARCN1P48444 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.61■□□□□ 0.25
ARCN1P48444 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.61■□□□□ 0.25
ARCN1P48444 AC064836.3-201ENST00000607928 673 ntBASIC16.61■□□□□ 0.25
ARCN1P48444 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 PMS2P7-201ENST00000506558 1336 ntBASIC16.61■□□□□ 0.25
ARCN1P48444 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
ARCN1P48444 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ARCN1P48444 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARCN1P48444 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARCN1P48444 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
ARCN1P48444 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.6■□□□□ 0.25
ARCN1P48444 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ARCN1P48444 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.6■□□□□ 0.25
ARCN1P48444 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARCN1P48444 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ARCN1P48444 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
ARCN1P48444 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ARCN1P48444 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ARCN1P48444 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.6■□□□□ 0.25
ARCN1P48444 HCG4B-203ENST00000450128 991 ntBASIC16.6■□□□□ 0.25
ARCN1P48444 POU5F1P6-201ENST00000466990 990 ntBASIC16.6■□□□□ 0.25
ARCN1P48444 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.6■□□□□ 0.25
ARCN1P48444 AC018845.2-201ENST00000568326 409 ntBASIC16.6■□□□□ 0.25
ARCN1P48444 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
ARCN1P48444 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.6■□□□□ 0.25
ARCN1P48444 GPALPP1-207ENST00000611650 899 ntBASIC16.6■□□□□ 0.25
ARCN1P48444 AC023511.2-201ENST00000618803 211 ntBASIC16.6■□□□□ 0.25
ARCN1P48444 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.6■□□□□ 0.25
ARCN1P48444 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.6■□□□□ 0.25
ARCN1P48444 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms