Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SLC6A12P48065 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
SLC6A12P48065 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A12P48065 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC6A12P48065 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC6A12P48065 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A12P48065 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A12P48065 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
SLC6A12P48065 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SLC6A12P48065 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SLC6A12P48065 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A12P48065 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A12P48065 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A12P48065 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A12P48065 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A12P48065 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC6A12P48065 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A12P48065 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SLC6A12P48065 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SLC6A12P48065 MED15P5-201ENST00000423150 992 ntBASIC15.98■□□□□ 0.15
SLC6A12P48065 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC6A12P48065 KRT18P3-201ENST00000451602 1288 ntBASIC15.98■□□□□ 0.15
SLC6A12P48065 AC074386.1-202ENST00000463561 864 ntBASIC15.98■□□□□ 0.15
SLC6A12P48065 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC6A12P48065 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC6A12P48065 RNA5SP416-201ENST00000516838 111 ntBASIC15.98■□□□□ 0.15
SLC6A12P48065 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC6A12P48065 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC6A12P48065 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC6A12P48065 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A12P48065 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
SLC6A12P48065 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC6A12P48065 AC068137.2-201ENST00000605408 478 ntBASIC15.98■□□□□ 0.15
SLC6A12P48065 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A12P48065 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A12P48065 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SLC6A12P48065 AL592424.1-201ENST00000563624 1536 ntBASIC15.98■□□□□ 0.15
SLC6A12P48065 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SLC6A12P48065 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
SLC6A12P48065 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A12P48065 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SLC6A12P48065 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC6A12P48065 PCDHA1-201ENST00000378133 2726 ntBASIC15.97■□□□□ 0.15
SLC6A12P48065 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC6A12P48065 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC6A12P48065 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC6A12P48065 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC6A12P48065 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC6A12P48065 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SLC6A12P48065 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC6A12P48065 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.97■□□□□ 0.15
SLC6A12P48065 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.97■□□□□ 0.15
SLC6A12P48065 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC6A12P48065 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SLC6A12P48065 AP002472.1-201ENST00000577490 586 ntBASIC15.97■□□□□ 0.15
SLC6A12P48065 AC092865.6-201ENST00000642101 219 ntBASIC15.97■□□□□ 0.15
SLC6A12P48065 AC016027.1-202ENST00000607927 1699 ntBASIC15.97■□□□□ 0.15
SLC6A12P48065 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SLC6A12P48065 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC6A12P48065 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC6A12P48065 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC6A12P48065 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SLC6A12P48065 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A12P48065 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A12P48065 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC6A12P48065 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC6A12P48065 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC6A12P48065 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A12P48065 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A12P48065 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC6A12P48065 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A12P48065 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A12P48065 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SLC6A12P48065 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A12P48065 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC6A12P48065 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A12P48065 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A12P48065 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms