Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-1P43699 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-1P43699 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-1P43699 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 KRT8P49-201ENST00000604166 1432 ntBASIC13.65□□□□□ -0.22
NKX2-1P43699 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 AC097376.2-205ENST00000610159 5334 ntBASIC13.65□□□□□ -0.22
NKX2-1P43699 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-1P43699 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-1P43699 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NKX2-1P43699 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
NKX2-1P43699 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-1P43699 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-1P43699 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-1P43699 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 AC113347.1-201ENST00000413321 391 ntBASIC13.65□□□□□ -0.22
NKX2-1P43699 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
NKX2-1P43699 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.65□□□□□ -0.22
NKX2-1P43699 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-1P43699 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-1P43699 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-1P43699 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.65□□□□□ -0.22
NKX2-1P43699 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.65□□□□□ -0.22
NKX2-1P43699 AC012306.2-201ENST00000609350 630 ntBASIC13.65□□□□□ -0.22
NKX2-1P43699 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-1P43699 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.65□□□□□ -0.22
NKX2-1P43699 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NKX2-1P43699 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NKX2-1P43699 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-1P43699 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NKX2-1P43699 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-1P43699 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
NKX2-1P43699 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NKX2-1P43699 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-1P43699 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
NKX2-1P43699 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX2-1P43699 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX2-1P43699 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 OR2I1P-210ENST00000642037 4691 ntBASIC13.64□□□□□ -0.23
NKX2-1P43699 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX2-1P43699 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX2-1P43699 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX2-1P43699 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX2-1P43699 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NKX2-1P43699 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX2-1P43699 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 HBZP1-201ENST00000354915 429 ntBASIC13.64□□□□□ -0.23
NKX2-1P43699 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.64□□□□□ -0.23
NKX2-1P43699 ACTG1P4-201ENST00000425123 1122 ntBASIC13.64□□□□□ -0.23
NKX2-1P43699 AL137013.1-201ENST00000432946 1228 ntBASIC13.64□□□□□ -0.23
NKX2-1P43699 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX2-1P43699 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.64□□□□□ -0.23
NKX2-1P43699 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX2-1P43699 RNF126P1-202ENST00000569893 925 ntBASIC13.64□□□□□ -0.23
NKX2-1P43699 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NKX2-1P43699 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX2-1P43699 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX2-1P43699 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 AL136379.1-201ENST00000623471 2642 ntBASIC13.64□□□□□ -0.23
NKX2-1P43699 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX2-1P43699 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX2-1P43699 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NKX2-1P43699 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX2-1P43699 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NKX2-1P43699 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX2-1P43699 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX2-1P43699 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX2-1P43699 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms